Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 170 4e-37
seq13242 93.3 1e-13
>seq13163
Length=1194233
Score = 170 bits (188), Expect = 4e-37
Identities = 178/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || ||||| | |||||||| ||||| || || |||||
Sbjct 711770 ATTCCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCG 711829
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || ||||| |||||||| ||||| || |||||||| || || | || ||||| |||
Sbjct 711830 GAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGA 711889
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||||||||| || ||||| ||||| |||||||| | || || || ||||
Sbjct 711890 GGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCT 711949
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||||| || || || || || ||||| || ||||| ||||| || ||||| |||
Sbjct 711950 ACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTTG 712003
Score = 159 bits (176), Expect = 8e-34
Identities = 154/198 (78%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || ||||||||||| || |||||||| |||||||| || ||||| |||
Sbjct 709857 GTAGATTCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCA 709916
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || |||| | ||| ||||| ||||| ||||| ||||| ||||| || || || ||
Sbjct 709917 GCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTC 709976
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| ||||||| ||| ||| || ||| || || || || || || || || || || ||
Sbjct 709977 ACGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTC 710036
Query 104543 TTTACAAATATCTGCATT 104560
||||| || |||||||||
Sbjct 710037 TTTACGAAGATCTGCATT 710054
>seq13242
Length=2670346
Score = 93.3 bits (102), Expect = 1e-13
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900
||||| ||| |||| | || || || || | | || ||||||||||| || ||||||
Sbjct 1009683 TTTATCTCTCATATCTTGGCATTCTTCGCCGCTTCCGACGGTATCGTTAATGAGAATCTA 1009742
Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960
| |||| ||| |||| ||||| | || | ||||| | ||||| ||||| |||||
Sbjct 1009743 ATTGAGAGATTCAGTCAGGAGGTGAAAATCGCCGAAGCACGTTGTTTCTACGGCTTCCAA 1009802
Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016
|| || ||||| || || ||||| || ||||| | | | || || ||||||||
Sbjct 1009803 ATCGCGATAGAGAACATCCATTCTGAAATGTATTCTTTGCTCATTGAAACTTATAT 1009858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151202814112664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |