Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq13202 104 2e-17 >seq13202 Length=1347106 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 25756 CCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCG 25815 |||| ||| |||| | |||||| ||||||| || || || | || ||||||||| || Sbjct 1326192 CCCGTGTAATCTGTGCGCATGTCTTTGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCA 1326133 Query 25816 TACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCT 25875 || || || || || || || || || || | | ||||| | | ||||| || | Sbjct 1326132 TAGACAGGCCCCAGATCACCTTCCTCTCTATCCGTGAAGCCGCACGAGTCCAAGAAAGCC 1326073 Query 25876 CTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG 25935 | |||||||| ||||||| || | || ||||| || | || ||||||||||| || Sbjct 1326072 CGCGAACCATTCTCGTCCCAAATGTGAACACCCTTATCCGTTAGTTCTTTGGAGTTCGTC 1326013 Query 25936 GACCCTCTGACGAACCACAGCAGCTCC 25962 || ||| ||| ||||||| ||| ||| Sbjct 1326012 GATCCTTTGATAAACCACAACAGTTCC 1325986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340082639928834