Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq12852 87.8 1e-12 >seq12852 Length=38369 Score = 87.8 bits (96), Expect = 1e-12 Identities = 209/311 (67%), Gaps = 4/311 (1%) Strand=Plus/Minus Query 70277 AGTCAAGAAGATGGAAAACCGTGATGCGGTGGAAGCGACTGTCTGGGGCGCATATTCC-A 70335 ||| || ||||||||||| ||||||| || ||||| || || |||||| ||| | | Sbjct 34699 AGTTAAAAAGATGGAAAAGCGTGATGACGTAGAAGCTACCGTATGGGGCTG-TATGGCTA 34641 Query 70336 TTGCATACTCTGACGGCACCTGCGATGCGAAAGAAATTGC-AGTATTGGAAAAAACCATT 70394 | || | |||| || ||| ||| |||| | || | | ||| ||||||| | Sbjct 34640 TCGCTTTTGCTGATGGTGATTGCAGTGCTGAAGAGTTAGCTACTCTTG-AAAAAACTGTA 34582 Query 70395 GCAGCACTTCCTGCCTTTGCGCCGTTCTCCGGTGAAATTGCCCAGATGAGCGCCAATATT 70454 || || ||||| ||||| | ||||||||||||||||| |||| || ||| | Sbjct 34581 GCTGCTAAGCCTGCATTTGCAGCATTCTCCGGTGAAATTGCTTCTATGACTGCTAATGCT 34522 Query 70455 CGCGCTCAATATGAAGCCTCGCCGCGCCGAGCGAATGCCCAGGCTTTACGTGAACTGGCT 70514 || | |||||| || || || | || || | || | ||| |||| Sbjct 34521 AAACAGCAGTTTGAAGCTTCTCCTCGTTCTGGCAAAGCAGAAGCCATGCGTCAACTTAAA 34462 Query 70515 GACGTGTCTGGAACTAATGATGCGGTAGATGTTCTGTGCCTATGCATTGATATTGCTGAC 70574 ||||| | || || ||| ||||||||||||||||||||| ||| | ||| |||| || Sbjct 34461 GACGTAGCCGGTACCGATGCTGCGGTAGATGTTCTGTGCCTTTGCTTAGATGTTGCCGAT 34402 Query 70575 CAGGATGGCAT 70585 | | |||||| Sbjct 34401 AAAGGTGGCAT 34391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303186202687818