Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq13090 125 4e-24 >seq13090 Length=265331 Score = 125 bits (138), Expect = 4e-24 Identities = 192/274 (70%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 3855 TGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTG 3914 |||| | ||| | || ||||| || || ||||||||| | ||||| || |||||||| | Sbjct 28688 TGAAGCACACCAATGGTAAAGGCGTGCACTTTATGATGTCGGACGGAGGCTTCTCGGTGG 28747 Query 3915 AGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAA 3974 |||||||||| ||||| || || || || ||||| | ||||| |||||||||| | Sbjct 28748 AGGGTCAAGAGAATATACAGGAGATTTTGTCGAAGCAATTGTATCTGTGTCAATGCCTGG 28807 Query 3975 TTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTA 4034 | || ||||||| | | || || || | ||||| || | |||||| | |||| Sbjct 28808 TGGCGCTGATGATAGTGAGGCCAGGAGGGCACTTTGTTACGAAGCTGTTCGATTTGTTTA 28867 Query 4035 CACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTT 4094 | ||||| || || || | || || ||||||||| | || | |||| || || | Sbjct 28868 CGCCTTTCAGCGCCGGACTTGTCTACCTGATGTATAAGTGCTTCGAGAGTATCTGCATCT 28927 Query 4095 TCAAACCACATTCATCGCGACCGGCCAATTCTGA 4128 |||| || | ||| | ||||||||||| || Sbjct 28928 TCAAGCCCAACAGCTCGAGGCCGGCCAATTCGGA 28961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276508913950774