Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 134 1e-26
seq13096 87.8 2e-12
seq13245 86.0 6e-12
>seq13163
Length=1194233
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | | |||||| || ||||| | |||||||||||||| | ||||| |||
Sbjct 709827 CCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAA 709886
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || || ||||||||||| || | |||||||| | |||||||| ||||||
Sbjct 709887 AGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGA 709946
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || |||||||| | ||||| ||||| ||| | | ||||| | |||||
Sbjct 709947 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACT 710006
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||||||||| || || ||||| || || |||||||||||
Sbjct 710007 TCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053
Score = 125 bits (138), Expect = 6e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836
|| |||||| | | |||| |||| || | ||||||||||| || | ||| || ||
Sbjct 711769 CATTCCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTC 711828
Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896
| | || || || ||||| || || || ||||||| | | ||||||||| ||
Sbjct 711829 GGAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGG 711888
Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956
||||||||||||||| || | || || || ||||| | | |||||||| ||
Sbjct 711889 AGGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTC 711948
Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| || | ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 711949 TACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATG 712000
>seq13096
Length=514919
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| || |||| ||||||||||||||| ||||||||||| | ||| || || |
Sbjct 6544 CCACCTCGCAGGCGCAGCACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCCGAC 6485
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || ||||||| ||| || ||| | ||||| | || |||||||| || |||
Sbjct 6484 AAAGTTCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAGCCTCTGCTGATCCGGCGGA 6425
Query 94901 ATACCT 94906
|| |||
Sbjct 6424 ATTCCT 6419
>seq13245
Length=2836997
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||||||||||||||| ||| | ||||| | | |||||||| || || || || || ||
Sbjct 675161 ATCCTCCAGCTGTTTGCCGGCGAAGATGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTT 675102
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | || || ||||||||| ||| ||| || | || || || | |||||
Sbjct 675101 GTCCTGGATCTTGGCCTTGACGTTCTCGATAGTATCGGACGCCTCCACCTCGAGGGTGAT 675042
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
||| || || || || || || || ||||||||||||
Sbjct 675041 GGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 675005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448216906940880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |