Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq13163 134 1e-26 seq13096 87.8 2e-12 seq13245 86.0 6e-12 >seq13163 Length=1194233 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | |||||| || ||||| | |||||||||||||| | ||||| ||| Sbjct 709827 CCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAA 709886 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || || ||||||||||| || | |||||||| | |||||||| |||||| Sbjct 709887 AGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGA 709946 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | ||||| ||||| ||| | | ||||| | ||||| Sbjct 709947 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACT 710006 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||||||||| || || ||||| || || ||||||||||| Sbjct 710007 TCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||| | | |||| |||| || | ||||||||||| || | ||| || || Sbjct 711769 CATTCCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTC 711828 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | | || || || ||||| || || || ||||||| | | ||||||||| || Sbjct 711829 GGAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGG 711888 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 ||||||||||||||| || | || || || ||||| | | |||||||| || Sbjct 711889 AGGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTC 711948 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || | ||||||||||||||||| ||||||||||||||||| |||||| Sbjct 711949 TACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATG 712000 >seq13096 Length=514919 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || |||| ||||||||||||||| ||||||||||| | ||| || || | Sbjct 6544 CCACCTCGCAGGCGCAGCACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCCGAC 6485 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||||||| ||| || ||| | ||||| | || |||||||| || ||| Sbjct 6484 AAAGTTCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAGCCTCTGCTGATCCGGCGGA 6425 Query 94901 ATACCT 94906 || ||| Sbjct 6424 ATTCCT 6419 >seq13245 Length=2836997 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| ||| | ||||| | | |||||||| || || || || || || Sbjct 675161 ATCCTCCAGCTGTTTGCCGGCGAAGATGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTT 675102 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||||||| ||| ||| || | || || || | ||||| Sbjct 675101 GTCCTGGATCTTGGCCTTGACGTTCTCGATAGTATCGGACGCCTCCACCTCGAGGGTGAT 675042 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || || || || || || || |||||||||||| Sbjct 675041 GGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 675005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448216906940880