Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq13163 114 1e-20 seq13175 82.4 7e-11 >seq13163 Length=1194233 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | ||||| ||||| | ||||||||| | || ||| |||| || || || Sbjct 712003 CAACATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTAGAAGC 711944 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | |||||| ||||| || |||||||| || ||||| || Sbjct 711943 TTCTGACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCTCCGGA 711884 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| || | ||||| | | ||||||||||| ||||| | ||||| | | ||| || Sbjct 711883 TCAGCAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCCGACTA 711824 Query 24167 TAACATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || |||||||| ||||| Sbjct 711823 CAACATCCAGAAGGAATCTACGCTTCAT 711796 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || ||||| || |||| || ||| | || ||| | |||||||| || Sbjct 711772 AATGCAGATCTTCGTAAAGACTCTAACGGGCAAAACCATCACCCTGGAAGTCGAAGCTTC 711713 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | || || || || |||||||| || || || || ||||| Sbjct 711712 GGACACCATTGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGGATTCCCCCGGATCA 711653 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151 |||| | |||||| || |||||||||||||||||||| ||| Sbjct 711652 ACAGCGTTTGATTTTCGCCGGCAAGCAACTCGAAGATGGCAG 711611 >seq13175 Length=923006 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 24021 AAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATT 24080 ||| |||| || | || |||||||| ||||| |||||| | || || || ||| Sbjct 562158 AAAACGATCACGCTGGAGGTCGAGGCTTCGGACACGATCGAGAACGTGAAGGCTAAAATT 562099 Query 24081 ACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTC 24140 |||||||| ||||| |||||| |||| || |||||||| | || |||||||||||| Sbjct 562098 CAAGACAAAGAGGGCATTCCTCCCAATCAGCAAAGACTGATATTCGCGGGCAAGCAACTC 562039 Query 24141 GAAGA 24145 || || Sbjct 562038 GAGGA 562034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429866530134990