Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq13163 127 2e-24 seq13242 82.4 7e-11 >seq13163 Length=1194233 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | |||| ||||| || | || || |||||||| || || || ||| Sbjct 709826 GCCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGA 709885 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | ||| || ||||| ||||| ||| |||||||||||||||| |||||||| Sbjct 709886 AAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGG 709945 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| |||||||| |||||| ||| | | || | || |||| | |||| Sbjct 709946 AATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGAC 710005 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | |||||| || || ||||| |||||||| |||||||| Sbjct 710006 TTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 >seq13242 Length=2670346 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 46067 TTAATGCGTTTGA-ACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGG 46125 |||||||| | || ||| | || || ||| | ||||| || | ||||| |||| ||| Sbjct 1010067 TTAATGCGATCGAGACGCTT-CCTTGTGTGGGAAAGAAGGCCAATTGGGCATTGAACTGG 1010125 Query 46126 ATCAA-CAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGG 46184 ||||| || || | ||| || || | || ||| | | || || ||| || ||||| Sbjct 1010126 ATCAATCACGAG-AGCGCTACATTTCCTGAACGTGTAATCGCGTTCGCGGCGGTTGAGGG 1010184 Query 46185 CGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGC 46243 |||| || ||||||||||| || ||||| | | || || | |||| |||||| Sbjct 1010185 TATCTTCTTCAGCGGCAGTTTTGCAGCGATCTTCTGGCTGAAGAAGCGAGGGG-TCATGC 1010243 Query 46244 CCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGA 46283 | || || || ||||||||||| || || ||||| ||||| Sbjct 1010244 CAGGGCTCACCTTTAGCAACGAACTCATCTCGCGAGACGA 1010283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471934575678720