Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 98.7 9e-16
seq13245 96.9 3e-15
>seq13163
Length=1194233
Score = 98.7 bits (108), Expect = 9e-16
Identities = 163/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || ||| | || || ||| ||||||| |||| || || | |||
Sbjct 711999 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTAGAAGCTTCT 711940
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|||||||| || |||| |||| || ||| || |||||||| ||||| || ||
Sbjct 711939 GACACTATTGAAAATGTCA---AAGC-TAAGATCCAAGATAAAGAAGGTATTCCTCCGGA 711884
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| || || | || ||||| ||||| ||| | ||||| | | || | ||| ||
Sbjct 711883 TCAGCAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCCGACTA 711824
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||| || || || ||||| ||||| ||| | || || | || | |||||||
Sbjct 711823 CAACATCCAGAAGGAATCTACGCTTCATCTGGTCCTGCGTCTCCGCGGAGGAA 711771
>seq13245
Length=2836997
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| ||||| || || || ||||| | || || || ||||||| |||| |||||| ||
Sbjct 675003 ACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGGCG 675062
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || ||||||||| | ||| || ||| ||||| || || || || |||||
Sbjct 675063 TCCGATACTATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGAT 675122
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| |||||| | || || ||||||||||| | || |||| ||||| | ||| |||
Sbjct 675123 CAGCAGCGGCTCATCTTCGCCGGCAAACAGCTGGAGGATGGACGCACACTCTCCGACTAC 675182
Query 25176 AATATTCAAAAAG 25188
|| || || ||||
Sbjct 675183 AACATACAGAAAG 675195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433257982049270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |