Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq13163 98.7 9e-16 seq13245 96.9 3e-15 >seq13163 Length=1194233 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| | || || ||| ||||||| |||| || || | ||| Sbjct 711999 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTAGAAGCTTCT 711940 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || |||| |||| || ||| || |||||||| ||||| || || Sbjct 711939 GACACTATTGAAAATGTCA---AAGC-TAAGATCCAAGATAAAGAAGGTATTCCTCCGGA 711884 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || || || | || ||||| ||||| ||| | ||||| | | || | ||| || Sbjct 711883 TCAGCAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCCGACTA 711824 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||| || || || ||||| ||||| ||| | || || | || | ||||||| Sbjct 711823 CAACATCCAGAAGGAATCTACGCTTCATCTGGTCCTGCGTCTCCGCGGAGGAA 711771 >seq13245 Length=2836997 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || ||||| | || || || ||||||| |||| |||||| || Sbjct 675003 ACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGGCG 675062 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||||||| | ||| || ||| ||||| || || || || ||||| Sbjct 675063 TCCGATACTATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGAT 675122 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||||| | || || ||||||||||| | || |||| ||||| | ||| ||| Sbjct 675123 CAGCAGCGGCTCATCTTCGCCGGCAAACAGCTGGAGGATGGACGCACACTCTCCGACTAC 675182 Query 25176 AATATTCAAAAAG 25188 || || || |||| Sbjct 675183 AACATACAGAAAG 675195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433257982049270