Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq13242 132 5e-26 seq13246 116 4e-21 seq13235 113 5e-20 >seq13242 Length=2670346 Score = 132 bits (146), Expect = 5e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || || || || || | || |||||||||||||||||||| ||||| || || |||||| Sbjct 1009858 ATATAAGTTTCAATGAGCAAAGAATACATTTCAGAATGGATGTTCTCTATCGCGATTTGG 1009799 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || ||||||||||| | ||||| | ||| | ||| || ||| |||||||| | ||| Sbjct 1009798 AAGCCGTAGAAACAACGTGCTTCGGCGATTTTCACCTCCTGACTGAATCTCTCAATTAGA 1009739 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || ||||| || ||||| ||||| || || || || ||||| ||||| ||||| | | Sbjct 1009738 TTCTCATTAACGATACCGTCGGAAGCGGCGAAGAATGCCAAGATATGAGAGATAAAGTAT 1009679 Query 93542 TTCTCATC 93549 |||| || Sbjct 1009678 CTCTCGTC 1009671 >seq13246 Length=2934203 Score = 116 bits (128), Expect = 4e-21 Identities = 82/91 (90%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| || |||||||||| Sbjct 1327069 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCATCTGGGAGCGTGG 1327128 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||||||||||| |||| | || || Sbjct 1327129 GTTCGAACCCCACACCTGGCAAACTTTTTTT 1327159 >seq13235 Length=2400731 Score = 113 bits (124), Expect = 5e-20 Identities = 77/84 (92%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||| |||||||||||||||| || |||||||||| Sbjct 1676081 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGATCTGGTTCCCATCTGGGAGCGTGG 1676022 Query 126327 GTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||| | ||||| Sbjct 1676021 GTTCGAACCCCACACTTAGCAAAT 1675998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556768514243920