Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq13242 132 5e-26
seq13246 116 4e-21
seq13235 113 5e-20
>seq13242
Length=2670346
Score = 132 bits (146), Expect = 5e-26
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|| || || || || | || |||||||||||||||||||| ||||| || || ||||||
Sbjct 1009858 ATATAAGTTTCAATGAGCAAAGAATACATTTCAGAATGGATGTTCTCTATCGCGATTTGG 1009799
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| ||||||||||| | ||||| | ||| | ||| || ||| |||||||| | |||
Sbjct 1009798 AAGCCGTAGAAACAACGTGCTTCGGCGATTTTCACCTCCTGACTGAATCTCTCAATTAGA 1009739
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| ||||| || ||||| ||||| || || || || ||||| ||||| ||||| | |
Sbjct 1009738 TTCTCATTAACGATACCGTCGGAAGCGGCGAAGAATGCCAAGATATGAGAGATAAAGTAT 1009679
Query 93542 TTCTCATC 93549
|||| ||
Sbjct 1009678 CTCTCGTC 1009671
>seq13246
Length=2934203
Score = 116 bits (128), Expect = 4e-21
Identities = 82/91 (90%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||| ||||| |||||||||| || ||||||||||
Sbjct 1327069 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCATCTGGGAGCGTGG 1327128
Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357
|||||||||||||||||| |||| | || ||
Sbjct 1327129 GTTCGAACCCCACACCTGGCAAACTTTTTTT 1327159
>seq13235
Length=2400731
Score = 113 bits (124), Expect = 5e-20
Identities = 77/84 (92%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||| |||||||||||||||| || ||||||||||
Sbjct 1676081 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGATCTGGTTCCCATCTGGGAGCGTGG 1676022
Query 126327 GTTCGAACCCCACACCTGACAAAT 126350
||||||||||||||| | |||||
Sbjct 1676021 GTTCGAACCCCACACTTAGCAAAT 1675998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556768514243920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |