Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq13132 113 1e-21 >seq13132 Length=482538 Score = 113 bits (124), Expect = 1e-21 Identities = 335/510 (66%), Gaps = 9/510 (2%) Strand=Plus/Plus Query 2974 TATTACCAATGGGTTTTCATCGTATTGTTCATCCAAGCGGTGTTCTTCTCCATTCCGCAG 3033 ||||| || ||||| | | || | ||| |||||||| | |||||| | | |||| Sbjct 24559 TATTATCAGTGGGTCTGCTTCACTCTTTTCTTCCAAGCGATCCTCTTCTACTTGCCGCGC 24618 Query 3034 TACATCTGGAAGGTATGTGAAGGAGGGAAAATGAAGACATTGGCTCATGATCTGACTTCA 3093 ||| | ||||| |||| || || || | ||| |||| ||| | || || | || Sbjct 24619 TACCTGTGGAAAATATGGGAGGGCGGCAGAATCAAGATGCTGGTGCTGGACCTCAATTGT 24678 Query 3094 CCGTTCCTGAGCAAAGAGTGCATCACAGAGAAGGTGG--ATCATTTGATGGATTATTTTT 3151 ||| || | ||| | || |||| | | || | | | | || | || || || Sbjct 24679 CCGGTCGTCAGCGAGGACTGCA--AGGGCGACCGGCGTAAGCTGCTGGTCGACTACTTCG 24736 Query 3152 TCATGCAGCTGCACGCGCAAAACTCTTACGCCTACAAATACTTTGGCTGCGAGCTGCTAA 3211 |||| | |||||| |||| |||| ||||| ||| | ||| | ||||||||||| | Sbjct 24737 CCATGAATCTGCACTCGCAGAACTTCTACGCGTACCGCTTCTTCGTGTGCGAGCTGCTCA 24796 Query 3212 ACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTATAGGCGAAGACTTTT 3271 |||| |||||||| |||| ||||| | || || || |||| | | || || || Sbjct 24797 ACTTCGTCAACGTGGTCGGCCAGATCTTTTTTATAAACTTCTTTCTGGACGGCGAGTTCA 24856 Query 3272 TGTTGTACGGAATCTATGTTACCTTCTTCAACCAGGAAGCCGCCC-ATCCGAACATGACG 3330 |||||| | | |||| | |||| | || | | |||| | | ||| || Sbjct 24857 CCACGTACGGCTCCGACGTTATCAGGTTCACCGAG-ATGGAGCCCGAGGAGCGCAT--CG 24913 Query 3331 AACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCT 3390 | ||||||| | || || || | | || || || || | || || ||| | Sbjct 24914 A-CCCCATGTCGAAGGTGTTCCCGAAGGTGACCAAGTGCACGTTCTATAAGTATGGTGCG 24972 Query 3391 TCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAG 3450 || ||||| || | || ||||| || |||||| | || ||| ||| | ||||||||| Sbjct 24973 TCCGGCTCGGTGCAGAAGTACGACGGTCTCTGCGTGCTGCCGCTCAACATCGTCAACGAG 25032 Query 3451 AAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||||||| | |||||||||||||||||| Sbjct 25033 AAGATCTACGTGTTCCTCTGGTTCTGGTTC 25062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478190283000