Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq13132 113 1e-21
>seq13132
Length=482538
Score = 113 bits (124), Expect = 1e-21
Identities = 335/510 (66%), Gaps = 9/510 (2%)
Strand=Plus/Plus
Query 2974 TATTACCAATGGGTTTTCATCGTATTGTTCATCCAAGCGGTGTTCTTCTCCATTCCGCAG 3033
||||| || ||||| | | || | ||| |||||||| | |||||| | | ||||
Sbjct 24559 TATTATCAGTGGGTCTGCTTCACTCTTTTCTTCCAAGCGATCCTCTTCTACTTGCCGCGC 24618
Query 3034 TACATCTGGAAGGTATGTGAAGGAGGGAAAATGAAGACATTGGCTCATGATCTGACTTCA 3093
||| | ||||| |||| || || || | ||| |||| ||| | || || | ||
Sbjct 24619 TACCTGTGGAAAATATGGGAGGGCGGCAGAATCAAGATGCTGGTGCTGGACCTCAATTGT 24678
Query 3094 CCGTTCCTGAGCAAAGAGTGCATCACAGAGAAGGTGG--ATCATTTGATGGATTATTTTT 3151
||| || | ||| | || |||| | | || | | | | || | || || ||
Sbjct 24679 CCGGTCGTCAGCGAGGACTGCA--AGGGCGACCGGCGTAAGCTGCTGGTCGACTACTTCG 24736
Query 3152 TCATGCAGCTGCACGCGCAAAACTCTTACGCCTACAAATACTTTGGCTGCGAGCTGCTAA 3211
|||| | |||||| |||| |||| ||||| ||| | ||| | ||||||||||| |
Sbjct 24737 CCATGAATCTGCACTCGCAGAACTTCTACGCGTACCGCTTCTTCGTGTGCGAGCTGCTCA 24796
Query 3212 ACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTATAGGCGAAGACTTTT 3271
|||| |||||||| |||| ||||| | || || || |||| | | || || ||
Sbjct 24797 ACTTCGTCAACGTGGTCGGCCAGATCTTTTTTATAAACTTCTTTCTGGACGGCGAGTTCA 24856
Query 3272 TGTTGTACGGAATCTATGTTACCTTCTTCAACCAGGAAGCCGCCC-ATCCGAACATGACG 3330
|||||| | | |||| | |||| | || | | |||| | | ||| ||
Sbjct 24857 CCACGTACGGCTCCGACGTTATCAGGTTCACCGAG-ATGGAGCCCGAGGAGCGCAT--CG 24913
Query 3331 AACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCT 3390
| ||||||| | || || || | | || || || || | || || ||| |
Sbjct 24914 A-CCCCATGTCGAAGGTGTTCCCGAAGGTGACCAAGTGCACGTTCTATAAGTATGGTGCG 24972
Query 3391 TCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAG 3450
|| ||||| || | || ||||| || |||||| | || ||| ||| | |||||||||
Sbjct 24973 TCCGGCTCGGTGCAGAAGTACGACGGTCTCTGCGTGCTGCCGCTCAACATCGTCAACGAG 25032
Query 3451 AAGATCTACATTTTCCTCTGGTTCTGGTTC 3480
||||||||| | ||||||||||||||||||
Sbjct 25033 AAGATCTACGTGTTCCTCTGGTTCTGGTTC 25062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12478190283000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |