Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq13163 134 1e-26 >seq13163 Length=1194233 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || |||| ||||||||| || | ||||||||| ||||| || || || ||| Sbjct 709827 CCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAA 709886 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| | ||||| || ||||| |||||| |||| | |||||| || ||||||||| Sbjct 709887 AGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGA 709946 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || |||||||| || || || | | ||| | |||||||| | |||||| Sbjct 709947 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACT 710006 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | |||||||| || ||||| ||||| || |||||||| Sbjct 710007 TCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || || | || || | ||| | ||||||||| || || |||||||| ||| Sbjct 711770 ATTCCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCG 711829 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||||| ||||| || ||||| |||| ||||| || || |||||| Sbjct 711830 GAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGA 711889 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| |||||||| || ||||| ||| | | ||||| ||||| | | ||| Sbjct 711890 GGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCT 711949 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | ||||| || || |||||||| ||||| || |||||| Sbjct 711950 ACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATG 712000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420066513895896