Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 104 3e-17
seq13131 98.7 1e-15
seq13254 96.9 4e-15
seq13136 96.9 4e-15
seq13111 96.9 4e-15
seq13060 93.3 5e-14
seq13171 87.8 2e-12
>seq13163
Length=1194233
Score = 104 bits (114), Expect = 3e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|||||||| ||||| || || | ||||| | |||| || ||||| || ||||||||
Sbjct 709863 TCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAG 709922
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | |||||||| || | || | | ||| |||||| |||||| || | |
Sbjct 709923 ATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTT 709982
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | |||||| | ||| || |||| ||||||||||||||||| || ||||||||
Sbjct 709983 TCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACG 710042
Query 42198 AAGATTTGCATT 42209
||||| ||||||
Sbjct 710043 AAGATCTGCATT 710054
>seq13131
Length=480535
Score = 98.7 bits (108), Expect = 1e-15
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 284136 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 284195
Query 57058 TCACCACTATACTACCGAGGA-TTGA 57082
| ||||||||||||||||||| ||||
Sbjct 284196 TGACCACTATACTACCGAGGACTTGA 284221
>seq13254
Length=3624882
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 2022497 AAAAAAGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2022556
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 2022557 TGACCACTATACTACCGAGGA 2022577
>seq13136
Length=507102
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 423351 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 423292
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 423291 TAACCACTATACTACCGAGGA 423271
>seq13111
Length=348602
Score = 96.9 bits (106), Expect = 4e-15
Identities = 82/100 (82%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 206995 AAAAAAAATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 207054
Query 57058 TCACCACTATACTACCGAGGA-TTGAATATATAACTTGAA 57096
| |||||||||||| |||||| ||| | || ||||||||
Sbjct 207055 TGACCACTATACTATCGAGGACTTGGGTTTAAAACTTGAA 207094
>seq13060
Length=241660
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| |||||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 227399 AAAAAAATTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 227458
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||| ||||||
Sbjct 227459 TAACCACTATACTATCGAGGA 227479
>seq13171
Length=910560
Score = 87.8 bits (96), Expect = 2e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 405124 AAAAAGAATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 405065
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||| ||||||
Sbjct 405064 TAACCACTATACTATCGAGGA 405044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543122776058720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |