Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq13245 91.5 1e-13
seq13163 91.5 1e-13
seq13189 89.7 5e-13
>seq13245
Length=2836997
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313
|||| || |||||||| || | || ||||| | || || ||||| |||||||| | |
Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136
Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373
||||||||||||| || || || || || || || || || || || ||| || ||
Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076
Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
| | ||||| || ||||| || | || | ||||||||| || | || || ||||
Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016
Query 64434 AAATTTGCAT 64443
| || |||||
Sbjct 675015 AGATCTGCAT 675006
>seq13163
Length=1194233
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | || | |||| || | ||| ||||| ||||| || || || || |
Sbjct 709827 CCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAA 709886
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | ||||||| ||||| ||||| || | || | |||||||| || ||||||
Sbjct 709887 AGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGA 709946
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
||||| ||||| || || ||||| ||| || || | || || || || |||
Sbjct 709947 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACT 710006
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | || | ||| ||||| || | ||| |||||||| || ||||||
Sbjct 710007 TCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCATT 710054
>seq13189
Length=1149699
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 154031 AAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTC 154090
||| || || | ||||||||| | ||| || | ||| | ||| | || || | || ||
Sbjct 402414 AAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTCGTGTAGGGTTCAATGGACTC 402355
Query 154091 GTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTT 154150
||| || ||||| || || || || | ||||| |||||| ||| | || | ||| ||
Sbjct 402354 GTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATAGGCGCTATTAAAAGAGAATT 402295
Query 154151 TCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAGG 154210
|| | ||||| ||||| || | || || || |||||| ||| || | || ||
Sbjct 402294 TCTTACTCCGTGCTTTGCGATTTTCTTCTTCAATTCGTCCCAATCCCATAAATCTGTCGG 402235
Query 154211 TTGCACGTTCCACATGTCGTATTG 154234
| ||||||||||||||||||||
Sbjct 402234 CTTAACGTTCCACATGTCGTATTG 402211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499561996365520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |