Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq13163 105 7e-18 seq13189 84.2 2e-11 >seq13163 Length=1194233 Score = 105 bits (116), Expect = 7e-18 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 138389 CGCCTC-GCAAA--CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||||| || || ||||||||||| || | | || |||||||| || || |||||| Sbjct 709825 CGCCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGG 709884 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | ||| || || ||||| || | |||||| |||||| || ||||||| Sbjct 709885 AAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAG 709944 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || || |||||||| |||||| || | | ||| | |||||||| | || | Sbjct 709945 GAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGA 710004 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | ||||| || || ||||| ||||| || |||||||| Sbjct 710005 CTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || | ||| | | || ||||| || |||||||||||| Sbjct 711773 CCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAA 711832 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || ||||| || || | | |||| ||||| || || |||||||| Sbjct 711833 AGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGA 711892 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||||||||| || ||| || ||| | | ||| | ||||| | | || ||| Sbjct 711893 ATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACC 711952 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | ||||| ||||| |||||||| ||||| || |||||| Sbjct 711953 TCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATG 712000 >seq13189 Length=1149699 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 153041 AAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTC 153100 ||| || || | ||| || ||||||| || | ||| | ||| | ||||||| ||| || Sbjct 402414 AAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTCGTGTAGGGTTCAATGGACTC 402355 Query 153101 GTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATT 153160 |||||| |||| || || ||||| | || || ||||| ||| | || | |||||| Sbjct 402354 GTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATAGGCGCTATTAAAAGAGAATT 402295 Query 153161 CCGCAAGCCGTGCGCT-CGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACG 153219 | | |||||| | ||| | || || ||||| | | ||||||||| | | | || Sbjct 402294 TCTTACTCCGTGCTTTGCGATTTTCTTC-TTCAATTCGTCCCAATCCCATAAATCTGTCG 402236 Query 153220 GTGTCGCGTTCCACATGTCGTACTG 153244 | | |||||||||||||||| || Sbjct 402235 GCTTAACGTTCCACATGTCGTATTG 402211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496180156913760