Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 145 7e-30
seq13245 98.7 9e-16
seq13242 95.1 1e-14
>seq13163
Length=1194233
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| || ||||| | |||||| || || || | |||||| || ||||| ||||| || |||
Sbjct 709824 GCGCCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCG 709883
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || | || || |||||||| |||||| |||| || ||||||||||| |||
Sbjct 709884 GAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGA 709943
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || ||||| |||||| |||||| ||| | | ||| | |||||| | | |||
Sbjct 709944 GGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCG 710003
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||||| ||| | |||||||| || ||||| ||||| || ||||||||
Sbjct 710004 ACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053
>seq13245
Length=2836997
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983
|||| || || ||||| ||| | ||||| ||| || |||||||| || ||| |||
Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136
Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043
| | ||||||||||| || || ||||||||||||||| ||| || ||||| | |
Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076
Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103
||| || || | ||| || |||| ||| | || ||||| || || || || || |
Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016
Query 127104 AAATCTGCATGG 127115
| ||||||||||
Sbjct 675015 AGATCTGCATGG 675004
>seq13242
Length=2670346
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118
|||||| | || || ||| | | |||||| | ||||| |||| | || | |||
Sbjct 1010076 TCGAGACGCTTCCTTGTGTGGGAAAGAAGGCCAATTGGGCATTGAACTGGATCAATCACG 1010135
Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178
| | || || | | |||||| | ||||| ||||| || ||||| ||||||||
Sbjct 1010136 AGAGCGCTACATTTCCTGAACGTGTAATCGCGTTCGCGGCGGTTGAGGGTATCTTCTTCA 1010195
Query 47179 CGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238
||||| ||||| ||||| || | |||| | ||| || ||||| || ||||| |
Sbjct 1010196 GCGGCAGTTTTGCAGCGATCTTCTGGCTGAAGAAGCGAGGGGTCATGCCAGGGCTCACCT 1010255
Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAG 47268
|||||||||| || |||||| |||||||||
Sbjct 1010256 TTAGCAACGAACTCATCTCGCGAGACGAAG 1010285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475421997629920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |