Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13163 145 7e-30 seq13245 98.7 9e-16 seq13242 95.1 1e-14 >seq13163 Length=1194233 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | |||||| || || || | |||||| || ||||| ||||| || ||| Sbjct 709824 GCGCCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCG 709883 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || | || || |||||||| |||||| |||| || ||||||||||| ||| Sbjct 709884 GAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGA 709943 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || ||||| |||||| |||||| ||| | | ||| | |||||| | | ||| Sbjct 709944 GGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCG 710003 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| ||| | |||||||| || ||||| ||||| || |||||||| Sbjct 710004 ACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 >seq13245 Length=2836997 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||| || || ||||| ||| | ||||| ||| || |||||||| || ||| ||| Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043 | | ||||||||||| || || ||||||||||||||| ||| || ||||| | | Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076 Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 ||| || || | ||| || |||| ||| | || ||||| || || || || || | Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016 Query 127104 AAATCTGCATGG 127115 | |||||||||| Sbjct 675015 AGATCTGCATGG 675004 >seq13242 Length=2670346 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118 |||||| | || || ||| | | |||||| | ||||| |||| | || | ||| Sbjct 1010076 TCGAGACGCTTCCTTGTGTGGGAAAGAAGGCCAATTGGGCATTGAACTGGATCAATCACG 1010135 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 | | || || | | |||||| | ||||| ||||| || ||||| |||||||| Sbjct 1010136 AGAGCGCTACATTTCCTGAACGTGTAATCGCGTTCGCGGCGGTTGAGGGTATCTTCTTCA 1010195 Query 47179 CGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238 ||||| ||||| ||||| || | |||| | ||| || ||||| || ||||| | Sbjct 1010196 GCGGCAGTTTTGCAGCGATCTTCTGGCTGAAGAAGCGAGGGGTCATGCCAGGGCTCACCT 1010255 Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAG 47268 |||||||||| || |||||| ||||||||| Sbjct 1010256 TTAGCAACGAACTCATCTCGCGAGACGAAG 1010285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475421997629920