Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_012696.1 Length=73325 Score E Sequences producing significant alignments: (Bits) Value seq12852 194 8e-45 seq12202 192 3e-44 seq8126 131 8e-26 >seq12852 Length=38369 Score = 194 bits (214), Expect = 8e-45 Identities = 413/607 (68%), Gaps = 15/607 (2%) Strand=Plus/Minus Query 30697 GAAGACAGAATCTCTGCACTCCAGACAAAAGATCCCGAAAAACTGAAGGTTTATACCGAT 30756 |||||| | || || || || || ||||| || | ||||| || |||||||||||| Sbjct 23301 GAAGACCGTATTTCAGCTCTGACAACCAAAGACCCTAATAAACTTAAAGTTTATACCGAT 23242 Query 30757 GGTTACGATGGTCACTCTCTACGGGCCTATGGTTACTTTGGTGATCAGATGCCAGATATC 30816 || || |||||||| ||||| | || | | ||| || || || || |||||||||||| Sbjct 23241 GGGTATGATGGTCATTCTCTCAGAGCATTCGCTTATTTCGGCGAGCACATGCCAGATATC 23182 Query 30817 GACCCTTCTTCTGTGGATTCGATCAACTCCATTGCGAAGAAGTA-CAAACCTCTGAGACA 30875 | | | | | | ||||| |||||| | ||| | | || | ||||| Sbjct 23181 GTTGATACAGTTTTAAGT---ATCAATAGCATTGCTGACGTGTATCCAGACTTT-AGACA 23126 Query 30876 GGAAAGCAAGGCTCCAACCTTTGCTCTCACCTATCAGGGTACATTCCATACTCTCATGGT 30935 || || || || || ||||| || |||||||| ||||| | || || || |||| Sbjct 23125 AGATTCTAAAGCACCTACTTTTGCACTTACCTATCAAGGTACTTATCACACACTGATGGC 23066 Query 30936 CAACTGTGGTTTCTCGAAAGAGAAAGCCCAAGACA-TCGAGAACAAGTACAAGAAAATGT 30994 |||||||| ||||| ||||||||| |||||||| | || | | ||| | || | | Sbjct 23065 TAACTGTGGCTTCTCTGAAGAGAAAG-CCAAGACAGTTGAACAGAGATACCATGAACTTT 23007 Query 30995 ACAAGGTCTCGATTGAGTTTGTGGAAAAGAAGCTCGAACAAGCTACTCGTGATGGCTACA 31054 | |||||| ||| | || | | ||| | | ||||| | | ||||| || | Sbjct 23006 ATTGGGTCTCTGATGAATGGGTTAACGATAAGTTAGCTCAAGCCAGCAGAGATGGTTATA 22947 Query 31055 TCACTGTAGCATTCGGTCTCCGTGTTCGAACTCCCTTACTTGCACAGACTATCCTTGGAA 31114 |||||| |||||||| | | |||| ||||| ||| | | | | || |||| Sbjct 22946 TCACTGGTGCATTCGGATTAAGGATTCGTACTCCATTAATCAAAAAAGTTGTCTGGGGAA 22887 Query 31115 CCAACAAGACACCCAAGGAAGCAGCAGCAGAAGGTAGAACAGCAGGGAATGCTATGGGTC 31174 ||| || || || | |||||| ||| ||||| ||||| || || |||||| | |||| Sbjct 22886 CCAGTAAAACTCCATATGAAGCAAAAGCTGAAGGCAGAACTGCTGGTAATGCTTTAGGTC 22827 Query 31175 AGTCATACTGTATGCTGAACTCCAGAGCAGCTTCTGAGTTCATGAAAAAGGTCAG--AGT 31232 | |||| ||| | ||||| | |||||||| ||||||||| || ||| | | | Sbjct 22826 AATCATGGTGTTTACTGAATAACCGAGCAGCTAACGAGTTCATGGAACGAGTCTGGAATT 22767 Query 31233 GTCC--AAGCATAAGCTAGACATCAAACCATGTGCTCATATCCATGATGCTCAATACTAT 31290 ||| | ||| || ||| ||||| ||||||||||| || ||||||||||| || ||| Sbjct 22766 CTCCATATGCAGAA-CTA---ATCAAGCCATGTGCTCAGATTCATGATGCTCAGTATTAT 22711 Query 31291 CTGGTTC 31297 || |||| Sbjct 22710 CTAGTTC 22704 Score = 87.8 bits (96), Expect = 8e-13 Identities = 122/169 (72%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 29770 ACCTATCTGGCTACCAATAGCTGTGCTGGCAATGAGCTAGGTCTCAAAGCTCAAGCACAA 29829 || ||||||||||||||| ||||| || |||||| |||| || ||||| || | || Sbjct 24197 ACGTATCTGGCTACCAATTCATGTGCAGGTAATGAGTTAGGGCTGAAAGCCCAGTCTCAT 24138 Query 29830 GAGTTTGCTGGGAACTATGCTGTCGAGGATATCCAAGACATCACTCAGATCGAACTAGCA 29889 ||||||||||| |||||||| || ||||| ||||| ||| | || ||| || Sbjct 24137 GAGTTTGCTGGAAACTATGCACAGGAAGATATTGCTGACATTACTAAAAT--TCCTATCA 24080 Query 29890 A--AGCTCTTGGAATACAACCTCGTAGATGGTCTTTCCACTTGGTATGT 29936 | |||| |||| |||||| | || || | | |||||||||||| Sbjct 24079 AAGAGCTTCTGGAGTACAACTTAGTTGACTGCTTAAGCACTTGGTATGT 24031 >seq12202 Length=11894 Score = 192 bits (212), Expect = 3e-44 Identities = 522/784 (67%), Gaps = 14/784 (2%) Strand=Plus/Minus Query 66129 ATGAATCCACCCTGTTGTCCGGTGACTTCGATACCGACACCTTGAGGTGAATACTCCTGT 66188 ||||||||||||||||| || || ||||| ||||| || |||||| ||||| | Sbjct 8533 ATGAATCCACCCTGTTGACCAGTAACTTCAATACCAACTGACTGAGGTTGGTACTCAACT 8474 Query 66189 GCAAAATTGAACAGATCGTTGATAGTT-TTGCCCATCTGTTGACGTTCGCACAGACCATC 66247 | | | || || || | | |||| ||| |||| |||||| || | |||||| Sbjct 8473 ACTAGTCTAAAGAGGTCATCAA-AGTTCTTGTTCATCAATTGACGACGACAGATACCATC 8415 Query 66248 AACCCAAATCCAGTTCCCATC-CTTGTCATAGGCCCAAACAGAAATCACTGTGTAATCAG 66306 |||||| | ||| | |||| || | || | |||| |||||||| |||| || |||| Sbjct 8414 AACCCAGAACCAATCACCATTGCTATTGATTG-CCCATACAGAAATAACTGAATAGTCAG 8356 Query 66307 CAGTTTGCTTGGAAGAAGTGGCAAAGTCAGTGGTGATGTAGAAGTTGTAG-TGCTTCCTA 66365 | | |||||| ||| || |||||||||||||| |||||||| | | | || | Sbjct 8355 CTGATTGCTTCTCGCTAGTAGCGAAGTCAGTGGTGATATAGAAGTTAAACATACCTC-TG 8297 Query 66366 TT--GGACAAGATGTCCATCCGAGACTTCCAACCAATCTCATCTTGTTGAATCAGACGAG 66423 || | | |||| | | || | ||| || ||| || | | || | Sbjct 8296 TTCAGTAAAAGAGA--CTTACGCTTGTACCATTGGATATCAGATTCCAGTACAAGCCTCT 8239 Query 66424 ACTCATCTGAGGTAATCCGAAGCATGAGTTCCTGACGGAAAG-ACTTTTCTTTCCCTTCC 66482 ||||| |||||||||| | ||| ||||||||| ||| | | || ||| | Sbjct 8238 CTTCATCAGAGGTAATCCTCAACATCAGTTCCTGATTGAATGCAGCCACCTGTCCAGTAG 8179 Query 66483 ATCACAGCAGAATCATACAT-CTCTTTCACATAATCGTATGTGAAGCGATCTTCCCAAGC 66541 | |||||| ||||| ||||| || | || |||| |||||| ||||||||||| Sbjct 8178 CT-ACAGCAAGGTCATATTGGCTCTTA-ACGAAGTCATATGAGAAGCGGTCTTCCCAAGC 8121 Query 66542 TCCGCTAAATTCTTCACGCTCACAAGGAAACTCTTTGCAGACAGGCCAGACGTTCACTTG 66601 || ||| ||||| | | ||||||| || | | || | || | ||||| || | Sbjct 8120 ACCTACAAAGTCTTCTCTCGCACAAGGGAATTTCTCACAAATGGGGAATACGTTGACGTA 8061 Query 66602 CCAAGCACCAGACTCAATTGCCTGATACACAATGTCTTCTTTGTTGAACGGAGTTCCATT 66661 |||| |||| || || | ||| | ||| | ||| || | ||||| || || || ||| | Sbjct 8060 CCAACCACCTGATTCCACTGCTTCATAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACT 8001 Query 66662 CAGAATCATCTTGTGACGAGTTGGATCCAACGCATACTGAACACCTGAGTATACAGTATC 66721 | || ||||| |||||| || ||||| ||||| | ||||||| |||||||||||| Sbjct 8000 GAAAACAATCTTTCTACGAGTAGGGTCCAAAGCATAATCAACACCTTTGTATACAGTATC 7941 Query 66722 GTTGATGGCTTCCATTGCAGTCGGTGATTTAGAATCAGCATCTGAGATCAAGTCGTCCAT 66781 |||||||| | ||| | | | ||||||| |||| |||| | | ||| |||| Sbjct 7940 CTTGATGGCCTGCATAGTTGACTTAGATTTAGCATCATCATCACTAACGAGGTCATCCAA 7881 Query 66782 GACAGCCAGTACAGGACGACGATTGAAGATCTTCGTACCCCGGATACCTGATTTGGCACC 66841 ||||||| |||||||| | |||||| || ||||| || | || | || ||||| Sbjct 7880 CACAGCCAAAACAGGACGTTTACCGAAGATTTTGGTACCACGTAAGCCAGTCTTAGCACC 7821 Query 66842 GAACATCTTGACGCCAAATTTACCACCATTTCTGTTGTGAAATTCCATGTAGTTTTCAGT 66901 ||||| || || | ||| |||| || ||||||||||||| ||||| Sbjct 7820 AAACATACGAACACCTAGCTTATGCCCATCAGCATTAGTAAATTCCATGTAGGCATCAGT 7761 Query 66902 GAAT 66905 ||| Sbjct 7760 AAAT 7757 >seq8126 Length=2631 Score = 131 bits (144), Expect = 8e-26 Identities = 387/588 (66%), Gaps = 18/588 (3%) Strand=Plus/Minus Query 61154 GCTTTCTGTTCGTCAACTGAAGCAGTCGAAATA-TCAACTTTGAGATCGAAGTTTCCTTC 61212 |||||||| | || || |||||| |||||| | ||||| || || |||||||| | Sbjct 603 GCTTTCTGGTTATCTGCTTCAGCAGTAGAAATACTTAACTTA-AGGTCAAAGTTTCCAGC 545 Query 61213 CAGTTCTGCACGAGAAACTTCCACAAACTCACGGTTTGTGACTCGGATGATTTCCTTTTC 61272 | ||| | | | |||| || || ||| || |||| ||| | | ||| | ||| Sbjct 544 TAATTCATCTCTACGAACTGATACGAAATCATCATTAGTGATTCGTACAACTTCTTCTTC 485 Query 61273 GCTCAAGAACTTACCGTTCATGGCAATCATTTTCATTCCGATGTCTTGAATACCTTTCGC 61332 ||||||| | | ||||| | | | || || || || ||| |||| || Sbjct 484 AGATAAGAACTCAGCATTCATAGATACAAACTTATAGCCAATATCCACAATGCCTTGAGC 425 Query 61333 CAAACGACGAAGGATACTCATTTCACGTTGAGCAGCAGAATCCAAAGCACCACGAATACC 61392 ||| | |||||| |||| | |||||||| || ||||| |||||| || ||||||||||| Sbjct 424 CAATCTACGAAGAATACCTAATTCACGTTTAGAAGCAGCATCCAATGCGCCACGAATACC 365 Query 61393 TGTAGCCACACGACCATAAGCATCTCCAGTGATACCCCCAGAGAACGACTTCACACCAGT 61452 | ||| ||| || |||| | | | ||||| ||||| ||||| || ||||| Sbjct 364 AGCAGCTACATCGCCTAAAGCTTGTGATGCAATACCTTGTGAGAATGACTTAACGCCAGT 305 Query 61453 CAGTGCTTCAGCTTCAGCATTCTGCCATTGAATCGTTTCATGAGCAGAACGAGGAATCTC 61512 || | |||||||||| ||||| | |||||| | | | || || |||||||||| Sbjct 304 AAGAGATTCAGCTTCATTGTTCTGATACTGAATCATCAGAGGCGCTGACTGAGGAATCTC 245 Query 61513 AGG----GTATTCCATCT-GACGGATGTTAGCTTTTGGATCACCATTTGGGTTGAACTCA 61567 ||| ||| | ||| | ||| | || | |||| || | |||| ||||||||| Sbjct 244 AGGAGACGTA-TGCATGTAGAC--ACCTT--GTCTTGGGTCCACGTTTGCATTGAACTCA 190 Query 61568 AAGTCTTCACCATTGGTGAATCGACGCTTGT---TCACAGGATCAAGGAAACCTTTAGCA 61624 ||||||| || || || ||| ||| |||| ||| | | ||||| | Sbjct 189 TAGTCTTCGCCCTTATCAAACTTACGTCTGTTAGTCAC---ATCCAACATGTCTTTACGA 133 Query 61625 TAACCAGTCTGTGCGTTTGCAGATCGACCCATGAGATCAATTACACCACGAGTCACAGCA 61684 |||||| || | || ||| ||| ||| | |||||| | ||||||| ||| Sbjct 132 ATACCAGTTTGACCATTAGCACTACGAGCCAGAATATCAATCATGGCACGAGTAGTAGCT 73 Query 61685 CCAATGATACGCTGATTGTCTTGAAGCAGCGAAGCATCAGCTTCACCA 61732 ||||| || ||| || |||| || | | | |||||| ||||||| Sbjct 72 CCAATAATCTTCTGGTTATCTTCCAGTAAAGCACCATCAGGTTCACCA 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234477306594268