Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_012697.1 Length=74611 Score E Sequences producing significant alignments: (Bits) Value seq12852 179 2e-40 seq12202 172 3e-38 seq8126 172 3e-38 >seq12852 Length=38369 Score = 179 bits (198), Expect = 2e-40 Identities = 407/602 (68%), Gaps = 15/602 (2%) Strand=Plus/Minus Query 32407 TTAGAAGACAGAATCTCTGCTCTTCAAACCAAAGACCCAGAAAAACTGAAGGTGTATACG 32466 || |||||| | || || ||||| |||||||||||| | ||||| || || ||||| Sbjct 23304 TTGGAAGACCGTATTTCAGCTCTGACAACCAAAGACCCTAATAAACTTAAAGTTTATACC 23245 Query 32467 GATGGTTACGATGGTCACTCTCTACGGGCCTATGGTTATTTTGGCGATCAAATGCCAGAT 32526 ||||| || |||||||| ||||| | || | | |||||| ||||| || ||||||||| Sbjct 23244 GATGGGTATGATGGTCATTCTCTCAGAGCATTCGCTTATTTCGGCGAGCACATGCCAGAT 23185 Query 32527 ATCGACCCTTCTTCTGTGGATTCA--ATCAACTCGATTGCAAAGAAGTA-CAAGCCTTTG 32583 |||| | | | || || | ||||| ||||| | ||| | || |||| Sbjct 23184 ATCG---TTGATACAGT--TTTAAGTATCAATAGCATTGCTGACGTGTATCCAGACTTT- 23131 Query 32584 AGACAGGAAAGCAAAGCTCCTACCTTTGCTCTCACCTATCAAGGTACGTTCCACACTCTC 32643 ||||| || ||||| ||||| ||||| || |||||||||||||| | ||||| || Sbjct 23130 AGACAAGATTCTAAAGCACCTACTTTTGCACTTACCTATCAAGGTACTTATCACACACTG 23071 Query 32644 ATGGTCAACTGTGGTTTCTCCAAAGAGAAGGCTCAGGACA-TCGAGAACAAGTACAAGAA 32702 |||| |||||||| ||||| ||||||| || || |||| | || | | ||| | | Sbjct 23070 ATGGCTAACTGTGGCTTCTCTGAAGAGAAAGC-CAAGACAGTTGAACAGAGATACCATGA 23012 Query 32703 GATGTACAAGGTCTCGATTGAGTATGTGGAGAAGAAGCTCGAACAGGCTACTCGTGATGG 32762 | || |||||| ||| | || | | ||| | | || || | | ||||| Sbjct 23011 ACTTTATTGGGTCTCTGATGAATGGGTTAACGATAAGTTAGCTCAAGCCAGCAGAGATGG 22952 Query 32763 CTACATCACTGTAGCTTTCGGTCTACGTGTTCGTACTCCTCTGCTTGCACAGACTATCCT 32822 || ||||||| || ||||| || | |||||||||| | | | | | || Sbjct 22951 TTATATCACTGGTGCATTCGGATTAAGGATTCGTACTCCATTAATCAAAAAAGTTGTCTG 22892 Query 32823 TGGAACCAACAAGACACCCAAGGAAGCAGCAGCAGAAGGCAGGACAGCAGGTAACGCTAT 32882 ||||||| || || || | |||||| ||| |||||||| || || ||||| ||| | Sbjct 22891 GGGAACCAGTAAAACTCCATATGAAGCAAAAGCTGAAGGCAGAACTGCTGGTAATGCTTT 22832 Query 32883 GGGTCAGTCATTCTGTATGCTGAACTCCAGAGCCGCATCTGAGTTTATGAAGAAGGTCAG 32942 ||||| |||| ||| | ||||| | |||| || ||||| ||| | ||| | Sbjct 22831 AGGTCAATCATGGTGTTTACTGAATAACCGAGCAGCTAACGAGTTCATGGAACGAGTCTG 22772 Query 32943 AGCGTCTAAGCATAAGCTGGAC--ATCAAACCATGTGCTCACATCCACGATGCCCAATAC 33000 ||| |||| || | || ||||| ||||||||||| || || ||||| || || Sbjct 22771 GAATTCT--CCATATGCAGAACTAATCAAGCCATGTGCTCAGATTCATGATGCTCAGTAT 22714 Query 33001 TA 33002 || Sbjct 22713 TA 22712 >seq12202 Length=11894 Score = 172 bits (190), Expect = 3e-38 Identities = 614/939 (65%), Gaps = 17/939 (2%) Strand=Plus/Minus Query 67152 AAAATGAATCTTCCCAGCCTTGAACAACGGAACCAC-GAGATTGAACCGCGACAGTTTGT 67210 |||| ||| ||| ||||| |||||| | || | || ||| ||||| | | || || | Sbjct 8686 AAAAAGAA-CTTACCAGCTTTGAACCAAGGTAATACTGAG-TTGAATCTCACCATCTTAT 8629 Query 67211 CCGTCATCGGTCGGATACCCGGTTTGTTGGTTTTGGGATCATGGGTCAAATTGAAGTAGA 67270 || | |||| |||||| |||||||| | || ||| | || || || ||| Sbjct 8628 TGGTATTAGGTCTGATACCTGGTTTGTTATTGTTTCCTTCAGAAGCAAAGTTAAACCAGA 8569 Query 67271 T-TCCACGACGATCCATCTCACTCATGATCCAAGGA-ATGAACCCACCCTGTTGTCCGGT 67328 | | | | ||| ||||| ||| | ||| || ||||| ||||||||||| || || Sbjct 8568 TGTTCCTGTTCATC-ATCTCG-TCACGTAACAAAGAGATGAATCCACCCTGTTGACCAGT 8511 Query 67329 GACTTCGATACCCACACCTTGAGGTGAATACTCCTGTGCAAAATTGAACAGATCGTTGAT 67388 ||||| ||||| || |||||| ||||| | | | | || || || | | Sbjct 8510 AACTTCAATACCAACTGACTGAGGTTGGTACTCAACTACTAGTCTAAAGAGGTCATCAA- 8452 Query 67389 AGTT-TTGCCCATCTGTTGACGTTCGCACAGACCATCAACCCAAATCCAGTTCCCATC-C 67446 |||| ||| |||| |||||| || | |||||||||||| | ||| | |||| | Sbjct 8451 AGTTCTTGTTCATCAATTGACGACGACAGATACCATCAACCCAGAACCAATCACCATTGC 8392 Query 67447 TTGTCATAGGCCCAAACAGAAATCACTGTGTAATCAGCGGTTTGCTTGGACGAAGTGGCA 67506 | | || | |||| |||||||| |||| || ||||| | |||||| ||| || Sbjct 8391 TATTGATTG-CCCATACAGAAATAACTGAATAGTCAGCTGATTGCTTCTCGCTAGTAGCG 8333 Query 67507 AAGTCAGTGGTGATATAGAAGTTGTAGTT-CTTCCGATTAG-ACAGGATGTCCATCCGAG 67564 ||||||||||||||||||||||| | | | || | | || | | || | | || Sbjct 8332 AAGTCAGTGGTGATATAGAAGTTAAACATACCTCTGTTCAGTAAAAGAGA--CTTACGCT 8275 Query 67565 ACTTCCAACCAATCTCATCTTGTTGGATCAGTCGTGATTCATCTGAGGTAATCCGAAGCA 67624 | ||| || ||| || | | || | |||||| |||||||||| | || Sbjct 8274 TGTACCATTGGATATCAGATTCCAGTACAAGCCTCTCTTCATCAGAGGTAATCCTCAACA 8215 Query 67625 TAAGTTCCTGACGGAAGGATTTCTCTT-TCCCTTCCATGACAGCAGACTCATACATCTCC 67683 | ||||||||| ||| | | | | ||| | | |||||| ||||| | Sbjct 8214 TCAGTTCCTGATTGAATGCAGCCACCTGTCCAGTAGCT-ACAGCAAGGTCATATTGGCTC 8156 Query 67684 TTCACGTACTGGTAAGTGAATCGGTCTTCCCAAGCTCCACTGAATTCCTCTTCTGTACAG 67743 || ||| | | || | ||| |||||||||||||| || || || ||| | ||| Sbjct 8155 TTAACGAAGTCATATGAGAAGCGGTCTTCCCAAGCACCTACAAAGTCTTCTCTCGCACAA 8096 Query 67744 GGAAACTCTTTGCAGACTGGCCATACGTTTACCTGCCAAGCACCAGATTCAATTGCCTGA 67803 || || | | || | || ||||||| || | |||| |||| ||||| | ||| | | Sbjct 8095 GGGAATTTCTCACAAATGGGGAATACGTTGACGTACCAACCACCTGATTCCACTGCTTCA 8036 Query 67804 TACACGATGTCTTCTTTATTGAACGGTGTTCCATTCAGAATCATCTTGTGACGAGTTGGA 67863 || | || || | || || || ||||| ||| | | || ||||| |||||| || Sbjct 8035 TAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAAACAATCTTTCTACGAGTAGGG 7976 Query 67864 TCCAAAGCATACTGAACACCGGAGTAGACCGTATCGTTGATCGCTTCCATTGCTGTTGGT 67923 ||||||||||| | |||||| ||| || ||||| ||||| || | ||| | || Sbjct 7975 TCCAAAGCATAATCAACACCTTTGTATACAGTATCCTTGATGGCCTGCATAGTTGACTTA 7916 Query 67924 GATTTGGAATCAGCATCTGAGATCAAGTCATCCATCACAGCAAGCACAGGACGACGGTTG 67983 ||||| | |||| |||| | | |||||||| |||||| | |||||||| | Sbjct 7915 GATTTAGCATCATCATCACTAACGAGGTCATCCAACACAGCCAAAACAGGACGTTTACCG 7856 Query 67984 AAAATCTTTGTACCCCGGATACCAGACTTGGCACCGAACATCTTCACACCAAACTTCCCA 68043 || || || ||||| || | |||| ||| ||||| ||||| ||||| | ||| Sbjct 7855 AAGATTTTGGTACCACGTAAGCCAGTCTTAGCACCAAACATACGAACACCTAGCTTATGC 7796 Query 68044 CCATTCCGGTTATAGAATTCCATGTAGTTTTCAGTGAAT 68082 |||| ||| |||||||||||| ||||| ||| Sbjct 7795 CCATCAGCATTAGTAAATTCCATGTAGGCATCAGTAAAT 7757 >seq8126 Length=2631 Score = 172 bits (190), Expect = 3e-38 Identities = 420/626 (67%), Gaps = 18/626 (3%) Strand=Plus/Minus Query 62293 ACCAACAGTCTGAAGAACCA-TACCAAGATCATTGGCTTTCTGTTCATCAACTGAAGCAG 62351 ||| | ||||||||| | | | |||| || | |||||||| | ||| || ||||| Sbjct 637 ACCCATAGTCTGAAGCATGAATGCCAAC-TCTTGTGCTTTCTGGTTATCTGCTTCAGCAG 579 Query 62352 TCGAGATATCAACCTTCAGATCAAAGTTCCCTTCCAGTTCTGCACGAGAAACTTCTACGA 62411 | || ||| | ||| || |||||||| || | | ||| | | | |||| ||||| Sbjct 578 TAGAAATACTTAACTTAAGGTCAAAGTTTCCAGCTAATTCATCTCTACGAACTGATACGA 519 Query 62412 ACTCACGGTTGGTAACTCGAATGATTTCCTTTTCACTCAAGAACTTACCGTTCATTGAGA 62471 | ||| || || | ||| | | ||| | |||| ||||||| | | ||||| || | Sbjct 518 AATCATCATTAGTGATTCGTACAACTTCTTCTTCAGATAAGAACTCAGCATTCATAGATA 459 Query 62472 TCATCTTCATA-CCAATGTCTTGAATACCTTTCGCCAGACGACGAAGGATACTCATTTCA 62530 | ||| ||| ||||| || ||| |||| |||| | |||||| |||| | |||| Sbjct 458 CAAACTT-ATAGCCAATATCCACAATGCCTTGAGCCAATCTACGAAGAATACCTAATTCA 400 Query 62531 CGTTGAGATGCAGAATCCAGAGCACCACGAATACCTGTAGCCACACGTCCATAAGCATCT 62590 |||| ||| |||| ||||| || ||||||||||| | ||| ||| || |||| | | Sbjct 399 CGTTTAGAAGCAGCATCCAATGCGCCACGAATACCAGCAGCTACATCGCCTAAAGCTTGT 340 Query 62591 CCAGAGATACCTCCAGAAAATGACTTCACACCAGTCAGTGCTTCAGCTTCAGCATTCTGC 62650 | |||||| || |||||||| || ||||| || | |||||||||| ||||| Sbjct 339 GATGCAATACCTTGTGAGAATGACTTAACGCCAGTAAGAGATTCAGCTTCATTGTTCTGA 280 Query 62651 CATTGAATCGTTTCATGAGCAGAACGAGGAATCTCAGGATA---TTCCATCT-GACGAAT 62706 | |||||| | | | || || |||||||||||||| | | ||| | ||| | Sbjct 279 TACTGAATCATCAGAGGCGCTGACTGAGGAATCTCAGGAGACGTATGCATGTAGAC--AC 222 Query 62707 GTTGGCTTTTGGATCACCATTCGGATTGAACTCAAAGTCTTCACCTTGAGTGAATCGACG 62766 ||| | |||| || | || | |||||||||| ||||||| || | | || ||| Sbjct 221 CTTG--TCTTGGGTCCACGTTTGCATTGAACTCATAGTCTTCGCCCTTATCAAACTTACG 164 Query 62767 CTTGT---TCACAGGATCAAGGAATCCTTTGGCATAACCAGTCTGTGCGTTGGCAGAACG 62823 ||| |||| ||| | | |||| | |||||| || | || ||| ||| Sbjct 163 TCTGTTAGTCAC---ATCCAACATGTCTTTACGAATACCAGTTTGACCATTAGCACTACG 107 Query 62824 ACCCATGAGATCAATCACACCACGAGTCACAGCACCAATGATACGCTGGTTATCCTGAAG 62883 | ||| | |||||||| ||||||| ||| ||||| || ||||||||| | || Sbjct 106 AGCCAGAATATCAATCATGGCACGAGTAGTAGCTCCAATAATCTTCTGGTTATCTTCCAG 47 Query 62884 CAGCGAAGCATCAGCTTCACCAAAGA 62909 | | | |||||| ||||||| ||| Sbjct 46 TAAAGCACCATCAGGTTCACCATAGA 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238591841652536