Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq13242 93.3 5e-14 >seq13242 Length=2670346 Score = 93.3 bits (102), Expect = 5e-14 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 127541 TCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTC 127600 ||||| || ||||||||||| || ||| || |||||||||| || ||||||||| Sbjct 1010283 TCGTCTCGCGAGATGAGTTCGTTGCTAAAGGTGAGCCCTGGCATGACCCCTCGCTTCTTC 1010224 Query 127601 AACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCA 127660 | |||||| ||||| ||| ||| ||||||||| ||||| || ||||||||| Sbjct 1010223 AGCCAGAAGATCGCTGCAAAACTGCCGCTGAAGAAGATACCCTCAACCGCCGCGAACGCG 1010164 Query 127661 AATAGACGCTC-GGCAAAGGAGCGGGACT-TTGT-ATCAAACCACTTCATCGCCCACTGT 127717 | || ||| || || || | |||| || | || || | ||| |||| ||||| | Sbjct 1010163 ATTACACGTTCAGGAAATGTAGCG---CTCTCGTGATTGATCCAGTTCAATGCCCAATTG 1010107 Query 127718 GCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 ||||| || | | ||| || | |||| |||||| | ||| Sbjct 1010106 GCCTTCTTTCCCACACAAGGAAGCGTCTCGATCGCATTAAA 1010066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613405526519280