Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq13202 95.1 2e-14 >seq13202 Length=1347106 Score = 95.1 bits (104), Expect = 2e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 115662 GTGTTTTGGAGGGCGGTGGCCGAGGAACTTATCTGGTTCCTTAAAGGTTGCACAGACGGC 115721 ||||| ||| | ||||||| ||||||||| | ||||| | ||||| | || || | Sbjct 1325963 GTGTTCTGGCGTGCGGTGGTCGAGGAACTGTTGTGGTTTATCAAAGGATCGACGAACTCC 1326022 Query 115722 GTTAAGCTTGCGGAGAAGGGTGTCAACATTTGGCGAGATAATGGAACTAGGTCCTTCTTG 115781 | || |||| |||||||| |||||||| || ||||| | || | |||||| Sbjct 1326023 AAAGAACTAACGGATAAGGGTGTTCACATTTGGGACGAGAATGGTTCGCGGGCTTTCTTG 1326082 Query 115782 GACTCCAGAGGTCTCACAGATCACAGA-GAACACGATCTGGGGCCGGTGTACGGATTTCA 115840 ||||| | || |||| ||| | ||| ||| ||||||||||| || || || || || Sbjct 1326083 GACTCGTGCGGCTTCACGGAT-AGAGAGGAAGGTGATCTGGGGCCTGTCTATGGCTTCCA 1326141 Query 115841 ATGGCGGCACTGGGGCGCC 115859 |||||||||| |||||| Sbjct 1326142 GTGGCGGCACTTTGGCGCC 1326160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795023422904480