Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_013691.1 Length=74901 Score E Sequences producing significant alignments: (Bits) Value seq9795 251 3e-62 seq12202 102 4e-17 seq12852 82.4 4e-11 >seq9795 Length=3651 Score = 251 bits (278), Expect = 3e-62 Identities = 672/1009 (67%), Gaps = 40/1009 (4%) Strand=Plus/Plus Query 59988 GCTACGGTCTTGATCAGCGCGATCCATTCCGGACGGTACACCA-TGAAGCCGTAGTACCA 60046 ||||| ||||||| ||| || |||||||| ||||| | || |||| ||||||||||| Sbjct 2627 GCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAA-CCGTAGTACCA 2685 Query 60047 CTTGATGGACATGAAGCCCATCTCGCCGTAGGGATC--CAGGCGGTCAGCAGTAGCTTCG 60104 ||||| || |||||||||| || || || || || || | | ||||| | | Sbjct 2686 TTTGATTGAGGTGAAGCCCATTTCACCATACGGGTCTGCATAAGAT--GCAGTCTCGATG 2743 Query 60105 CCGGGCTTCTTGTTGTAGATCTTGAACTTGACGTTCTTGCCATCGGTCTGGAAGCCGACA 60164 || || |||||| ||||| | |||||| || |||| ||||| |||||||| |||| | Sbjct 2744 CCTGGTTTCTTGGTGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGAAACCGATA 2803 Query 60165 GTGGTGAACGCTTCGGACGAGATCAC-CAGCATCGGGAAGATGCTGTACTTGTCGTTGAA 60223 |||||||| | | || | ||| |||||| ||||| | | ||||| | ||| Sbjct 2804 GTGGTGAAGGAGCCAGAACCAA-CACACAGCATTGGGAATACGTCATACTTACCA--GAA 2860 Query 60224 GT--CATGGTAGCCGTCGGCGGTCGGATCGACTGCCTTACCGGCTCCCTGCCAGTGCATC 60281 || | | ||| || | ||| | | | ||| ||| || || ||| | || | Sbjct 2861 GTAGCGTAGTAACCTGGGTTGGTAGTAACTGTTGC---ACCAGCACCTGCCCATTTCAGC 2917 Query 60282 ATCTGCGGGTTGATGATGATGCGGAACTGGTCGATTGCACCGATCTCGCCGATGAAGG-T 60340 |||| || | |||||||||||| |||| | ||| || || || || ||| | Sbjct 2918 ATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAACCAATTTCACCT-TGCAGGAT 2976 Query 60341 GTTGCCGCCGGCAGCGTACTTCTCGATGGAGATGAACGCCGGATTGCCGTGGTTGTCCTT 60400 | || | ||||||||| || | | |||||| || | |||| | ||| || Sbjct 2977 AGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGTCAAACGGGTCTTT 3036 Query 60401 CATGGCTTTC--AGGGTCGGGATCAGTTCACTGCCGCAGTACAGCGGACGGCAACCCGGA 60458 ||| ||| | || || | ||||||| || |||||| | ||| ||||||| Sbjct 3037 CAT--CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGTACAGAGCACGAGCACCCGGA 3094 Query 60459 ATGGTGCGGGTGTCGATCATCCGGGTACCGGTGATCATCTTGGTGCCCTTCGGGGCGCGG 60518 || || || || ||||| || | ||| | |||| |||||| | | || || Sbjct 3095 ATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCTTGGTCTGCATAGGACACAGG 3154 Query 60519 TTGTTGTCCAGGTCGATGTTGAGGCGCATCAGGGAGTCGTAGGTGACTTCCGTGGTGGCA 60578 |||| | ||| ||| | | ||| ||| ||||| ||| | || | | | Sbjct 3155 TTGTCATTCAGAGTGATACCCATCTTAACCAGACCGTCATAGGTAACTACAGTAGCAGTA 3214 Query 60579 TCCACTTCGCT-GTC----CTG-------GGTAGCTGCGCCCGGATAACGGACGACGCCG 60626 | ||| | ||| ||| |||||| || ||||||||||| || || || Sbjct 3215 CC---TTCACCAGTCATATCTGCATTAGAGGTAGCAGCACCCGGATAACGAACAACACCA 3271 Query 60627 GCGCTGTTCAGCAGATCGATCTGGAGCAGGTCTTCGGTCATCTCGTTGGCGCCTTT--CA 60684 || | |||||||| || ||||| | | |||| || || || ||||| || ||||| || Sbjct 3272 GCACCATTCAGCAGGTCAATCTGCAACTGGTCCTCAGTGATTTCGTTAGCACCTTTAACA 3331 Query 60685 GCATCTCGCGCCCAACGTGCATGTCCAGTTCTGCATCGCTATCGAAGTCCAGCGATTCCT 60744 || || | | | |||||| ||||| ||| | || |||| || |||| | ||||| Sbjct 3332 GCTTCCTGAATC--AGGTGCATATCCAGCTCTTCGTCAGTATCAAAATCCATTGCTTCCT 3389 Query 60745 GAGTGTACTCACGGAAGAAGCCGTACTTTTCCAGCTTGCCTTCGAGCAGAACACGCTTGA 60804 |||| ||||| |||||| ||| | || | | |||||| ||| ||| ||| ||| Sbjct 3390 GAGTCCACTCATAGAAGAAACCGAATTTCTTGATAGTGCCTTGCAGCTGAATACGGGTGA 3449 Query 60805 AGCCAACACGGTTCACACGACCGCCGACTTCGGTGAGGGTCGGCATCTTGCCGACGATGG 60864 | ||||| ||||| |||||||| || || || || | |||| || ||||| Sbjct 3450 AACCAACGCGGTTAACACGACCACCATTCTCAGTCAGAGCTGGCAGTTTAGATGGGATGG 3509 Query 60865 TGCCCACGTCACGGCTCGAACCATACAGGTTGCCGTTGGCGATGGTGGCGCCGGAAGCGT 60924 | || | ||| ||| |||||||||||||| ||||| || ||||| || || | ||| | Sbjct 3510 TACCAATGTCTTTGCTAGAACCATACAGGTTACCGTTAGCAATGGTAGCACCAGCAGCAT 3569 Query 60925 CGATACCCTGGTCGTTGATGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 60973 | ||||| |||||||||| ||| ||||| || ||||| ||||||||||| Sbjct 3570 CAATACCTTGGTCGTTGACGTTACGGTCATCCAGCAGTGGGATGTAGTG 3618 >seq12202 Length=11894 Score = 102 bits (112), Expect = 4e-17 Identities = 210/308 (68%), Gaps = 6/308 (2%) Strand=Plus/Minus Query 68151 GCAGTCATCATCAGTTCAGCCTGAACGTTGATCGCCTTCTGATAGATGTCAGCATTCAGA 68210 ||| ||| ||| | |||||||| |||||||| || |||||| | | |||||||||||| Sbjct 7080 GCATTCAACATTAAATCAGCCTGTACGTTGATTGCTTTCTGAAATACATCAGCATTCAGA 7021 Query 68211 ACGTGAGTCGGGATCAGTGTCTGTTCCAGGATCAGGTTCACCAGCTTCGACTTGTTGTAC 68270 || || || || | || |||||||| ||| ||||| |||||||| ||||||||| Sbjct 7020 ACATGGGTAGGAACCAAAGTCTGTTCATAGATAAGGTTAACCAGCTTGTTCTTGTTGTAA 6961 Query 68271 GCACTGACGTAGCTGGCGATGTCCTTCGATGCATAGTTCTGCATCGTCCACCGCT-GAAT 68329 ||| ||||||| | || || || | | | || | | | | | || Sbjct 6960 GCAGATACGTAGCAGTGAATATCTTTGGCAGGAACATTATTATTTAAGAAGTTTTGGTAT 6901 Query 68330 CTTGTCGGGGAAGGTTCGGCTGAATGCATCGATATTGGTGCAGCCCATCAGCTTGTGGCT 68389 | ||| ||||| ||| || ||| || | || ||||| ||||| | |||| || Sbjct 6900 C-GGTCAGGGAATGTTTTAATGTATGACTCAAAGTTAGTGCATCCCATTAACTTGAAACT 6842 Query 68390 GACGTACTTCACCGCATGGAT--GTACCCATCCAGCTTGAACTTACCCTCGTTCATCACA 68447 || |||||||| || |||| || |||| | ||| || |||| || ||||||||| Sbjct 6841 CACATACTTCACTGC--GGATAAATAATCATCAATCTTAAATCTACCTTCCTTCATCACA 6784 Query 68448 TGTGTGTA 68455 || ||||| Sbjct 6783 TGGGTGTA 6776 Score = 102 bits (112), Expect = 4e-17 Identities = 161/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 66992 TCTTCACGAAGTCATACGTGAAGCGGTCAGGCCATGCACCCCTGAAGTCCTTCTC-CGAG 67050 |||| ||||||||||| | ||||||||| ||| ||||| |||| |||||| || Sbjct 8157 TCTTAACGAAGTCATATGAGAAGCGGTCTTCCCAAGCACCTACAAAGT-CTTCTCTCGCA 8099 Query 67051 CAAGGGAACTTCTCGCACACAGGGTAGACGTTCACCTTCCAGGCACCGGACTCCACTGCT 67110 |||||||| ||||| || | ||| | ||||| || | ||| |||| || ||||||||| Sbjct 8098 CAAGGGAATTTCTCACAAATGGGGAATACGTTGACGTACCAACCACCTGATTCCACTGCT 8039 Query 67111 TTGTACAGAGGATCCTTGGCGTTAAACGGTGTAC--CTGACCAGATGATCATGTTGCGGG 67168 | || ||| ||| || |||||| ||||| | |||| | | ||| | | || | Sbjct 8038 TCATAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGA--AAACAATCTTTCTACGAG 7981 Query 67169 TTGGGTGCAGTGCGTAATCCACCGCCTTGTATACCGTGTCTTCGAT 67214 | |||| || || ||||| || | |||||||| || || | ||| Sbjct 7980 TAGGGTCCAAAGCATAATCAACACCTTTGTATACAGTATCCTTGAT 7935 >seq12852 Length=38369 Score = 82.4 bits (90), Expect = 4e-11 Identities = 178/264 (67%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 13343 TTTGCCGACGAGTTCGACAAGCTGCTGATCTCGGGCAATTCCAACTCGGACCTGGCCCAT 13402 |||| || || ||||||||| | | ||| | |||||| ||| || |||||||| Sbjct 30676 TTTGTAGATGAATTCGACAAGTTATTCATCGCAGGCAATAACAATAGTGAGTTGGCCCAT 30617 Query 13403 GAAAGCACTGCGGGGGTTCAGAATGAATTCCTGAAGATGCTGGAATCGGACATCACCAAG 13462 ||| || || ||||||||||||||||||||| | |||||| | || ||| Sbjct 30616 GAATCTACCAATGGAGTTCAGAATGAATTCCTGAAGGTTCTGGAAGCTGAGTGTACCTCA 30557 Query 13463 GTCTACGGCGACTACGGCAAGTACCAAGAAGTGAACGTCGGCAAAGTCCTCTTCATCTTC 13522 || | |||||||| |||||||| || || || | || || || || |||| Sbjct 30556 GTGTTTGGCGACTATGGCAAGTATGTGGACGTACCTGTAAGTAACGTTCTGTTTGTCTTT 30497 Query 13523 GCCGGCGCCTTCAATGGCGTG-GACATGAACAACCTCGACGACCTGCGTTCCGTCGGAGT 13581 ||||| || |||||||| | | | || | | || || | || ||| | | || || Sbjct 30496 GCCGGAGCATTCAATGGAGAGCCAGAT-ATTACTCTGGATAAGCTCCGTAGCTTTGGTGT 30438 Query 13582 CAAGAACGAGTTCCTGGGCCGTGT 13605 |||| |||||| | |||||||| Sbjct 30437 GAAGACTGAGTTCTTAGGCCGTGT 30414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239519691704556