Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_013692.1
Length=72544
Score E
Sequences producing significant alignments: (Bits) Value
seq9795 206 1e-48
seq12202 116 2e-21
>seq9795
Length=3651
Score = 206 bits (228), Expect = 1e-48
Identities = 666/1015 (66%), Gaps = 49/1015 (5%)
Strand=Plus/Plus
Query 60636 GCCACGGTCTTCAGCAGGGCGATCCACTCGGGGCGGAACACCA-TGAAGCCGTAGTACCA 60694
|| || ||||| | ||| || ||||| || || || | | || |||| |||||||||||
Sbjct 2627 GCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAA-CCGTAGTACCA 2685
Query 60695 CTTGATGGACATGAAGCCCATCTCGCCGTACGGGTCACTGCGGTCG--GCAGTGGCTTCG 60752
||||| || |||||||||| || || |||||||| ||| | ||||| | |
Sbjct 2686 TTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGATGCAGTCTCGATG 2743
Query 60753 CCAGGGCGCTTGGTGATGATCTTGAACTTGACGTTCTTGCCATCGGTAGCGAAACCGACA 60812
|| || ||||||| | | |||||| || |||| ||||| || |||||||| |
Sbjct 2744 CCTGGTTTCTTGGTGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGAAACCGATA 2803
Query 60813 GTGGTGAACGCCTCGGAAGCTACACACAGCATCGGGAAGACACTGTACTTGCCGCCGGAC 60872
|||||||| | | ||| | ||||||||||| ||||| || ||||| || ||
Sbjct 2804 GTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCATACTTACCA---GAA 2860
Query 60873 TCATGCATCGGAACCTGGTCGTTCGGGTCCACGGCCTTGC--CGACGCCGGCCCAGTGCA 60930
| || | | ||||||| ||| | || | |||| | | || ||||| | ||
Sbjct 2861 GTA-GCGTAGTAACCTGG--GTTGGTAGTAACTG--TTGCACCAGCACCTGCCCATTTCA 2915
Query 60931 TCATCTGCGGGTTGACGATGACGCGGAAGCGACCCAGCTGGCCGACTTCGCCGTGCATGG 60990
||||| || ||||||| |||||| | | | || | ||| || |||| |
Sbjct 2916 GCATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAACCAATTTCACCTTGCAGGA 2975
Query 60991 TGGCACCACCGGCAGCGTACTTCTCGATGGGGATGAAGGCCGGATTGCCGTGGTTGTCCT 61050
| | |||| | ||||||||| || | |||||||| || | |||| | ||| |
Sbjct 2976 TAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGTCAAACGGGTCTT 3035
Query 61051 TCATGGCTT-CGATGG-TCGGAACCAGATCGGAACCAACGTACAGAGCACGGGCGTTGCC 61108
|||| ||| || | || | |||| || ||||||| |||||||||||| || ||
Sbjct 3036 TCAT--CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGTACAGAGCACGAGCA---CC 3090
Query 61109 CACGGTA---CGGGTGTCGATCATGCGGGTACCGGTGATCATCTTGATCTTGGTCGGAGC 61165
| || || || || ||||| || | ||| | |||| |||| ||| | |||
Sbjct 3091 CGGAATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCTTGGTCTGCATAGGA-- 3148
Query 61166 ACGCGCGTTGTCCAGGTCCAGACGCAGACGCATC------AGCGAGTCGTAGGTGACCTC 61219
| | |||||| | |||| | || |||| || ||| ||||| || |
Sbjct 3149 -CACAGGTTGTCA---TTCAGAGTGATACCCATCTTAACCAGACCGTCATAGGTAACTAC 3204
Query 61220 GGTGGTGG---CGTCGACT------TCAGCGTCGGAGGTTGCAGCGCCCGGATAACGGAC 61270
|| | | | || | || || | ||||| ||||| ||||||||||| ||
Sbjct 3205 AGTAGCAGTACCTTCACCAGTCATATCTGCATTAGAGGTAGCAGCACCCGGATAACGAAC 3264
Query 61271 GGTGCCAGCCGAGTTGAGCAGGTCGATTTGCAGCAGGTCTTCGGTGATCTCGTTCGCGCC 61330
||||| || |||||||| || |||| | |||| || ||||| ||||| || ||
Sbjct 3265 AACACCAGCACCATTCAGCAGGTCAATCTGCAACTGGTCCTCAGTGATTTCGTTAGCACC 3324
Query 61331 CTTCACCATTTCGGTGGTGACGTGACCTTCCATCGCCGGATCGCTGTCGAAGTCGAGTTG 61390
|| || ||| | | ||| |||| | | || | || || || | |||
Sbjct 3325 TTTAACAGCTTCCTGAATCAGGTGCATATCCAGCTCTTCGTCAGTATCAAAATCCA-TTG 3383
Query 61391 CT-CTTGGGTGTACTCGCGGAAGAAGCCGTACTTCTCCAGCTTGCCCTTGATCTCGACAC 61449
|| | || || |||| |||||| ||| | |||| | |||| | | || | ||
Sbjct 3384 CTTCCTGAGTCCACTCATAGAAGAAACCGAATTTCTTGATAGTGCCTTGCAGCTGAATAC 3443
Query 61450 GCTTGAAACCAACACGGTTCACGCGACCGCCGATCTCGGTGAGGGTCGGCATCTTCGCGG 61509
| |||||||||| ||||| || ||||| || |||| || || | |||| || | |
Sbjct 3444 GGGTGAAACCAACGCGGTTAACACGACCACCATTCTCAGTCAGAGCTGGCAGTTTAGATG 3503
Query 61510 TGATGTTGCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCGG 61569
|||| | || | ||| ||| ||||| || ||||| ||||| || |||||||| || |
Sbjct 3504 GGATGGTACCAATGTCTTTGCTAGAACCATACAGGTTACCGTTAGCAATGGTAGCACCAG 3563
Query 61570 AAGCGTCGATACCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 61624
||| || ||||| |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct 3564 CAGCATCAATACCTTGGTCGTTGACGTTACGGTCATCCAGCAGTGGGATGTAGTG 3618
>seq12202
Length=11894
Score = 116 bits (128), Expect = 2e-21
Identities = 476/731 (65%), Gaps = 32/731 (4%)
Strand=Plus/Minus
Query 67943 ACGAAGTCATAGGTGAAGCGGTCAGGCCATGCACCACGGAACTCTTCCCTTGAGCAGGGG 68002
||||||||||| | ||||||||| ||| ||||| || ||||| || | || |||
Sbjct 8152 ACGAAGTCATATGAGAAGCGGTCTTCCCAAGCACCTACAAAGTCTTCTCTCGCACAAGGG 8093
Query 68003 AACCGCTCACATACCGGGTAGACGTTGACCTTCCAAGCACCAGACTCCACTGCTTTGTAC 68062
|| |||||| | ||| | |||||||| | |||| |||| || |||||||||| ||
Sbjct 8092 AATTTCTCACAAATGGGGAATACGTTGACGTACCAACCACCTGATTCCACTGCTTCATAA 8033
Query 68063 AGTGGATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTC--TTCGGGT 68120
|| ||| ||| ||| || ||||| || | | ||| |||| | | ||||
Sbjct 8032 AGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAAACAATC--TTTCTACGAGTAGGGT 7975
Query 68121 GCAGTGCATAGTCCACTGCCTTGTACACCGTGTCCTCAATGG-CTGCGATGACAGTGGGC 68179
|| ||||| || || | ||||| || || |||| |||| |||| | ||| | |
Sbjct 7974 CCAAAGCATAATCAACACCTTTGTATACAGTATCCTTGATGGCCTGC----ATAGTTGAC 7919
Query 68180 ---GAGCGAGCATCTTCGTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGTTTA 68236
|| |||||| || || ||| | |||||||| || || | |||||||||
Sbjct 7918 TTAGATTTAGCATCATCATCACTAACGAGGTCATCCAACACAGCCAAAACAGGACGTTTA 7859
Query 68237 CCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACCGTAGCCTTTGACGATGAAC-AC 68295
|| | || | |||||| | |||||||| ||||| | | | |||| | | |
Sbjct 7858 CCGAAGATTTTGGTACCACGTAAGCCAGTCTTAGCACC-AAACAT---ACGAACACCTAG 7803
Query 68296 CTT---CCCATCCAGGTTGGTGAACTTCCA-ACGGATATCAGTGAAGCTGGTCTGGGGGA 68351
||| |||||| || || || ||||| | |||||| || ||| || || |
Sbjct 7802 CTTATGCCCATCAGCATTAGT-AAATTCCATGTAGGCATCAGTAAATTTGGCCTCTGGAA 7744
Query 68352 TGTACTTCCTCAAGAACTCAGAGTTCTCCCAACGGAACTCCAGGTTCTTAC-GCATGTTC 68410
|||||||| | ||| |||||||| | | ||| | || | |||||| | ||| |
Sbjct 7743 TGTACTTCTGAAGGAATTCAGAGTTGTTATAGCGGTATTCAATGTTCTTTCTTAATGAT- 7685
Query 68411 TTCACACCGTTGTCGATGGAGTCCGATACATACAGAGCAAGGTCTACCTTACCGAAACCA 68470
|| || || || || || ||||| || | ||| | | || | | ||| || |||
Sbjct 7684 TTTACCCCATTCTCCATAGAGTCAGAGATATAAATCATACCTTCGATATCACCAAATCCA 7625
Query 68471 GGAAGCTCACCGTACAGTGCAATGTACAGGAACAGGTACTCACCCATCACGGTGGTCTTC 68530
|| ||| || ||||| ||||| || |||| || || ||||| | || ||| || ||
Sbjct 7624 TCAATCTCCCCATACAGGGCAATATATAGGACGAGATATTCACCAAACAGGGTAGTTTTA 7565
Query 68531 GCTGCACCACG-GAACACCATGTTGGCGATCCGGGT---CTGACCAGATCCAATCTGGTC 68586
|| |||||| || || | || || | || || | ||| | ||||| | ||
Sbjct 7564 GCCATACCACGAGAGCA-AAGATTAGCTAATCGAGTACGTTTACCTG--CCAAT-TCATC 7509
Query 68587 AAGCATTCGCAGGTGAAGTACTGGTGTCTTGTTCTCTTCCCCTTCGTTGCCGTTGACCAT 68646
|||||| || |||| |||||| || ||| |||||| | | || || ||||
Sbjct 7508 AAGCATCTTAAGATGAACTACTGGAGTAAGGTTAGATTCCCCACCTTCACCATTAACCAA 7449
Query 68647 CTTGATGAAGT 68657
|||||| ||||
Sbjct 7448 CTTGATAAAGT 7438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 231978510419690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |