Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_013692.1 Length=72544 Score E Sequences producing significant alignments: (Bits) Value seq9795 206 1e-48 seq12202 116 2e-21 >seq9795 Length=3651 Score = 206 bits (228), Expect = 1e-48 Identities = 666/1015 (66%), Gaps = 49/1015 (5%) Strand=Plus/Plus Query 60636 GCCACGGTCTTCAGCAGGGCGATCCACTCGGGGCGGAACACCA-TGAAGCCGTAGTACCA 60694 || || ||||| | ||| || ||||| || || || | | || |||| ||||||||||| Sbjct 2627 GCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAA-CCGTAGTACCA 2685 Query 60695 CTTGATGGACATGAAGCCCATCTCGCCGTACGGGTCACTGCGGTCG--GCAGTGGCTTCG 60752 ||||| || |||||||||| || || |||||||| ||| | ||||| | | Sbjct 2686 TTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGATGCAGTCTCGATG 2743 Query 60753 CCAGGGCGCTTGGTGATGATCTTGAACTTGACGTTCTTGCCATCGGTAGCGAAACCGACA 60812 || || ||||||| | | |||||| || |||| ||||| || |||||||| | Sbjct 2744 CCTGGTTTCTTGGTGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGAAACCGATA 2803 Query 60813 GTGGTGAACGCCTCGGAAGCTACACACAGCATCGGGAAGACACTGTACTTGCCGCCGGAC 60872 |||||||| | | ||| | ||||||||||| ||||| || ||||| || || Sbjct 2804 GTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCATACTTACCA---GAA 2860 Query 60873 TCATGCATCGGAACCTGGTCGTTCGGGTCCACGGCCTTGC--CGACGCCGGCCCAGTGCA 60930 | || | | ||||||| ||| | || | |||| | | || ||||| | || Sbjct 2861 GTA-GCGTAGTAACCTGG--GTTGGTAGTAACTG--TTGCACCAGCACCTGCCCATTTCA 2915 Query 60931 TCATCTGCGGGTTGACGATGACGCGGAAGCGACCCAGCTGGCCGACTTCGCCGTGCATGG 60990 ||||| || ||||||| |||||| | | | || | ||| || |||| | Sbjct 2916 GCATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAACCAATTTCACCTTGCAGGA 2975 Query 60991 TGGCACCACCGGCAGCGTACTTCTCGATGGGGATGAAGGCCGGATTGCCGTGGTTGTCCT 61050 | | |||| | ||||||||| || | |||||||| || | |||| | ||| | Sbjct 2976 TAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGTCAAACGGGTCTT 3035 Query 61051 TCATGGCTT-CGATGG-TCGGAACCAGATCGGAACCAACGTACAGAGCACGGGCGTTGCC 61108 |||| ||| || | || | |||| || ||||||| |||||||||||| || || Sbjct 3036 TCAT--CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGTACAGAGCACGAGCA---CC 3090 Query 61109 CACGGTA---CGGGTGTCGATCATGCGGGTACCGGTGATCATCTTGATCTTGGTCGGAGC 61165 | || || || || ||||| || | ||| | |||| |||| ||| | ||| Sbjct 3091 CGGAATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCTTGGTCTGCATAGGA-- 3148 Query 61166 ACGCGCGTTGTCCAGGTCCAGACGCAGACGCATC------AGCGAGTCGTAGGTGACCTC 61219 | | |||||| | |||| | || |||| || ||| ||||| || | Sbjct 3149 -CACAGGTTGTCA---TTCAGAGTGATACCCATCTTAACCAGACCGTCATAGGTAACTAC 3204 Query 61220 GGTGGTGG---CGTCGACT------TCAGCGTCGGAGGTTGCAGCGCCCGGATAACGGAC 61270 || | | | || | || || | ||||| ||||| ||||||||||| || Sbjct 3205 AGTAGCAGTACCTTCACCAGTCATATCTGCATTAGAGGTAGCAGCACCCGGATAACGAAC 3264 Query 61271 GGTGCCAGCCGAGTTGAGCAGGTCGATTTGCAGCAGGTCTTCGGTGATCTCGTTCGCGCC 61330 ||||| || |||||||| || |||| | |||| || ||||| ||||| || || Sbjct 3265 AACACCAGCACCATTCAGCAGGTCAATCTGCAACTGGTCCTCAGTGATTTCGTTAGCACC 3324 Query 61331 CTTCACCATTTCGGTGGTGACGTGACCTTCCATCGCCGGATCGCTGTCGAAGTCGAGTTG 61390 || || ||| | | ||| |||| | | || | || || || | ||| Sbjct 3325 TTTAACAGCTTCCTGAATCAGGTGCATATCCAGCTCTTCGTCAGTATCAAAATCCA-TTG 3383 Query 61391 CT-CTTGGGTGTACTCGCGGAAGAAGCCGTACTTCTCCAGCTTGCCCTTGATCTCGACAC 61449 || | || || |||| |||||| ||| | |||| | |||| | | || | || Sbjct 3384 CTTCCTGAGTCCACTCATAGAAGAAACCGAATTTCTTGATAGTGCCTTGCAGCTGAATAC 3443 Query 61450 GCTTGAAACCAACACGGTTCACGCGACCGCCGATCTCGGTGAGGGTCGGCATCTTCGCGG 61509 | |||||||||| ||||| || ||||| || |||| || || | |||| || | | Sbjct 3444 GGGTGAAACCAACGCGGTTAACACGACCACCATTCTCAGTCAGAGCTGGCAGTTTAGATG 3503 Query 61510 TGATGTTGCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCGG 61569 |||| | || | ||| ||| ||||| || ||||| ||||| || |||||||| || | Sbjct 3504 GGATGGTACCAATGTCTTTGCTAGAACCATACAGGTTACCGTTAGCAATGGTAGCACCAG 3563 Query 61570 AAGCGTCGATACCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 61624 ||| || ||||| |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 3564 CAGCATCAATACCTTGGTCGTTGACGTTACGGTCATCCAGCAGTGGGATGTAGTG 3618 >seq12202 Length=11894 Score = 116 bits (128), Expect = 2e-21 Identities = 476/731 (65%), Gaps = 32/731 (4%) Strand=Plus/Minus Query 67943 ACGAAGTCATAGGTGAAGCGGTCAGGCCATGCACCACGGAACTCTTCCCTTGAGCAGGGG 68002 ||||||||||| | ||||||||| ||| ||||| || ||||| || | || ||| Sbjct 8152 ACGAAGTCATATGAGAAGCGGTCTTCCCAAGCACCTACAAAGTCTTCTCTCGCACAAGGG 8093 Query 68003 AACCGCTCACATACCGGGTAGACGTTGACCTTCCAAGCACCAGACTCCACTGCTTTGTAC 68062 || |||||| | ||| | |||||||| | |||| |||| || |||||||||| || Sbjct 8092 AATTTCTCACAAATGGGGAATACGTTGACGTACCAACCACCTGATTCCACTGCTTCATAA 8033 Query 68063 AGTGGATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTC--TTCGGGT 68120 || ||| ||| ||| || ||||| || | | ||| |||| | | |||| Sbjct 8032 AGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAAACAATC--TTTCTACGAGTAGGGT 7975 Query 68121 GCAGTGCATAGTCCACTGCCTTGTACACCGTGTCCTCAATGG-CTGCGATGACAGTGGGC 68179 || ||||| || || | ||||| || || |||| |||| |||| | ||| | | Sbjct 7974 CCAAAGCATAATCAACACCTTTGTATACAGTATCCTTGATGGCCTGC----ATAGTTGAC 7919 Query 68180 ---GAGCGAGCATCTTCGTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGTTTA 68236 || |||||| || || ||| | |||||||| || || | ||||||||| Sbjct 7918 TTAGATTTAGCATCATCATCACTAACGAGGTCATCCAACACAGCCAAAACAGGACGTTTA 7859 Query 68237 CCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACCGTAGCCTTTGACGATGAAC-AC 68295 || | || | |||||| | |||||||| ||||| | | | |||| | | | Sbjct 7858 CCGAAGATTTTGGTACCACGTAAGCCAGTCTTAGCACC-AAACAT---ACGAACACCTAG 7803 Query 68296 CTT---CCCATCCAGGTTGGTGAACTTCCA-ACGGATATCAGTGAAGCTGGTCTGGGGGA 68351 ||| |||||| || || || ||||| | |||||| || ||| || || | Sbjct 7802 CTTATGCCCATCAGCATTAGT-AAATTCCATGTAGGCATCAGTAAATTTGGCCTCTGGAA 7744 Query 68352 TGTACTTCCTCAAGAACTCAGAGTTCTCCCAACGGAACTCCAGGTTCTTAC-GCATGTTC 68410 |||||||| | ||| |||||||| | | ||| | || | |||||| | ||| | Sbjct 7743 TGTACTTCTGAAGGAATTCAGAGTTGTTATAGCGGTATTCAATGTTCTTTCTTAATGAT- 7685 Query 68411 TTCACACCGTTGTCGATGGAGTCCGATACATACAGAGCAAGGTCTACCTTACCGAAACCA 68470 || || || || || || ||||| || | ||| | | || | | ||| || ||| Sbjct 7684 TTTACCCCATTCTCCATAGAGTCAGAGATATAAATCATACCTTCGATATCACCAAATCCA 7625 Query 68471 GGAAGCTCACCGTACAGTGCAATGTACAGGAACAGGTACTCACCCATCACGGTGGTCTTC 68530 || ||| || ||||| ||||| || |||| || || ||||| | || ||| || || Sbjct 7624 TCAATCTCCCCATACAGGGCAATATATAGGACGAGATATTCACCAAACAGGGTAGTTTTA 7565 Query 68531 GCTGCACCACG-GAACACCATGTTGGCGATCCGGGT---CTGACCAGATCCAATCTGGTC 68586 || |||||| || || | || || | || || | ||| | ||||| | || Sbjct 7564 GCCATACCACGAGAGCA-AAGATTAGCTAATCGAGTACGTTTACCTG--CCAAT-TCATC 7509 Query 68587 AAGCATTCGCAGGTGAAGTACTGGTGTCTTGTTCTCTTCCCCTTCGTTGCCGTTGACCAT 68646 |||||| || |||| |||||| || ||| |||||| | | || || |||| Sbjct 7508 AAGCATCTTAAGATGAACTACTGGAGTAAGGTTAGATTCCCCACCTTCACCATTAACCAA 7449 Query 68647 CTTGATGAAGT 68657 |||||| |||| Sbjct 7448 CTTGATAAAGT 7438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231978510419690