Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq12202 109 6e-19 >seq12202 Length=11894 Score = 109 bits (120), Expect = 6e-19 Identities = 77/88 (88%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 138527 AATGTGAGTGTGGCAGAGCGGTCGAATGCAGGAGACTGTAAATCTCCCCGTAACAGCGCG 138586 |||||||||||||||||| || ||||||| || ||||||||||| | | || ||||| Sbjct 6152 AATGTGAGTGTGGCAGAGAGGCCGAATGCGGGGGACTGTAAATCCCTTCTGAAAGGCGCG 6093 Query 138587 GTGGTTCGAATCCATCCACTCACACCAA 138614 |||||||||||||||||||||||||||| Sbjct 6092 GTGGTTCGAATCCATCCACTCACACCAA 6065 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136503 TGCGGGTTTTAAGAAACAGACCACAAAAATAAATGCAAACGATGATGTAGTTCTGATGGC 136562 ||||| |||| |||||| |||| ||| |||||||||||||||||||| ||||||||||| Sbjct 1550 TGCGGTTTTTTAGAAACGAACCAAAAACATAAATGCAAACGATGATGTTGTTCTGATGGC 1491 Query 136563 GGCGTAATAGCCTA 136576 || |||| || || Sbjct 1490 TGCTTAATTGCATA 1477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505407427470880