Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 141 2e-28
seq13096 96.9 8e-15
seq13245 87.8 4e-12
>seq13163
Length=1194233
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || || | |||||| || || |||||||||| || ||||| | | |||
Sbjct 709833 CGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAAAGAGTT 709892
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| || ||||||||||| || || |||||||| | ||||||||| |||||| ||||||
Sbjct 709893 CTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCC 709952
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| ||||| || || ||||||| ||| | |||||| | | ||| || || |
Sbjct 709953 TCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGG 710012
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || ||||||||||| || || || || ||
Sbjct 710013 GTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTG 710050
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| || || || || || ||||| |||| ||||||||| | | ||
Sbjct 711779 CGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTT 711838
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| || |||||||| ||||| || || ||||| ||||| ||||| |||||| ||| |||
Sbjct 711839 CTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCT 711898
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| || || ||||| || || ||| | ||||| | | |||||| || |
Sbjct 711899 TCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACCTCGAGG 711958
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || ||||||||||||||||| |||||
Sbjct 711959 GTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTG 711996
>seq13096
Length=514919
Score = 96.9 bits (106), Expect = 8e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| || | ||| || | ||| | ||| || |||||||| | ||||||||| | ||||||
Sbjct 6539 TCGCAGGCGCAGCACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCCGACAAAGT 6480
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
|| || || |||| |||||| ||||||||||| || | |||||| ||||| ||||||
Sbjct 6479 TCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAGCCTCTGCTGATCCGGCGGAATTCC 6420
Query 199528 T 199528
|
Sbjct 6419 T 6419
>seq13245
Length=2836997
Score = 87.8 bits (96), Expect = 4e-12
Identities = 133/188 (71%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| || | ||||||||| | | || | |||||| |||||||| || |||||||||
Sbjct 675196 CCTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAG 675137
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558
||||| |||||||| || || || || || ||||| ||||| ||| |||
Sbjct 675136 ATGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 675077
Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618
|||| || || | | || || || | ||||| ||||| |||||||| || || ||
Sbjct 675076 TCGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 675017
Query 199619 AAAATTTG 199626
|| || ||
Sbjct 675016 AAGATCTG 675009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178721338798286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |