Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq13163 82.4 5e-11 >seq13163 Length=1194233 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/196 (69%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA----TCGTCCAATTGTTTCCCGC 39583 ||| ||||| |||||||| |||| || | |||| || |||| ||||| || Sbjct 709862 TTCCTTTTGGATATTATAGTCGG----AAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAG 709917 Query 39584 CAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAA 39643 | || ||||||||||||||||||| || | || |||||||| ||||| || | Sbjct 709918 CGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCA 709977 Query 39644 TCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTT 39703 | ||| ||||| | ||| || || | || || ||||| ||||| | ||| | Sbjct 709978 CGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCT 710037 Query 39704 TTACGAAGATCTGCAT 39719 |||||||||||||||| Sbjct 710038 TTACGAAGATCTGCAT 710053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347313471368714