Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq13163 163 3e-35 seq13245 132 5e-26 seq13242 95.1 1e-14 >seq13163 Length=1194233 Score = 163 bits (180), Expect = 3e-35 Identities = 168/217 (77%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || |||||||| || ||||||||||||||||||||| |||| ||||| || | Sbjct 710054 AATGCAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTC 709995 Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | | ||||| | || | ||||||| ||||||||||||||||| | || | Sbjct 709994 CGACACCATAGAAAACG-TGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATC 709936 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| | || | ||| |||||||||||||| |||| | || || |||||| | Sbjct 709935 AGCAGCGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATA 709876 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | |||||||||||| | ||||| || || || |||| Sbjct 709875 ATATCCAAAAGGAATCTACGCTCCACTTAGTTTTGCG 709839 Score = 129 bits (142), Expect = 6e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| || || ||||| ||||| || |||||||||||| |||| || || || Sbjct 712002 AACATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTAGAAGCT 711943 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | ||| | |||| || |||| || ||||| || ||||| | || Sbjct 711942 TCTGACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCTCCGGAT 711883 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || || || | || ||||| || ||||| |||| | ||||| ||||||| Sbjct 711882 CAGCAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCCGACTAC 711823 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| |||||| | ||||| ||| |||| |||||| Sbjct 711822 AACATCCAGAAGGAATCTACGCTTCATCTGGTCCTGCGT 711784 Score = 123 bits (136), Expect = 2e-23 Identities = 143/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || |||||||| || || |||||||||||||||||| | || ||||| || | Sbjct 711772 AATGCAGATCTTCGTAAAGACTCTAACGGGCAAAACCATCACCCTGGAAGTCGAAGCTTC 711713 Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | ||||| | || | ||||||| ||||||||||| |||||| | || | Sbjct 711712 GGACACCATTGAAAACG-TGAAGGCCAAAATCCAGGACAAAGAGGGGATTCCCCCGGATC 711654 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | |||| ||| ||||| || || || || | | || || ||||||| Sbjct 711653 AACAGCGTTTGATTTTCGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGACTACA 711594 Query 38422 ACATCCAAAA 38431 ||||||| || Sbjct 711593 ACATCCAGAA 711584 >seq13245 Length=2836997 Score = 132 bits (146), Expect = 5e-26 Identities = 149/193 (77%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| ||||||||| |||| || ||||| || Sbjct 675006 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGGCGTCC 675065 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 || | | | |||| | || | || |||| ||||| ||||| || |||||| || | Sbjct 675066 GATACTATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGATC 675123 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||||||||| | ||| |||||||||||||| || | ||||| ||| |||||||| Sbjct 675124 AGCAGCGGCTCATCTTCGCCGGCAAACAGCTGGAGGATGGACGCACACTCTCCGACTACA 675183 Query 38422 ACATCCA-AAAGG 38433 |||| || ||||| Sbjct 675184 ACATACAGAAAGG 675196 >seq13242 Length=2670346 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || || || ||||| ||||||||||| || || | |||||| || |||||||| ||| Sbjct 1009855 TAAGTTTCAATGAGCAAAGAATACATTTCAGAATGGATGTTCTCTATCGCGATTTGGAAG 1009796 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| || || || || ||| | | | ||| || ||| ||| | ||| | ||||| Sbjct 1009795 CCGTAGAAACAACGTGCTTCGGCGATTTTCACCTCCTGACTGAATCTCTCAATTAGATTC 1009736 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCA 133324 || || ||||| |||||| |||||||| || |||| Sbjct 1009735 TCATTAACGATACCGTCGGAAGCGGCGAAGAATGCCA 1009699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500089908862720