Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq12921 179 1e-39
seq13163 116 1e-20
>seq12921
Length=52531
Score = 179 bits (198), Expect = 1e-39
Identities = 249/347 (72%), Gaps = 10/347 (3%)
Strand=Plus/Minus
Query 451270 TACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328
||| ||| |||||||| |||||||| ||| |||| ||| | ||||| || |
Sbjct 5637 TACAAAACATGAAAGAGGCAGCAGAAGCTTATCTTGGAGAGGAAGTAAAAGATGCTGTGA 5578
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
| || || || || || ||||| || | ||||| |||||||| |||||||||||| | |
Sbjct 5577 TAACAGTGCCAGCATACTTCAACGACTCTCAACGTCAAGCAACAAAAGATGCAGGAAAAA 5518
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
| || || |||||||| || |||| | |||||||| || || || || || || ||||
Sbjct 5517 TCGCCGGATTAAATGTACTCAGAATAGTAAATGAACCGACTGCCGCAGCGCTTGCTTATG 5458
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| || | | |||||||| | | | |||| | || | ||| ||||||| |
Sbjct 5457 GTCT-------TGATAAGAAACATGGGCACACAATA--GTGGTGTATGACCTTGGTGGTG 5407
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
| || |||| || ||||| ||| | || ||||| |||||||||||||| || |
Sbjct 5406 GTACATTTGATGTCTCAATACTTGAAATAGGTGAAGGGGTTTTTGAAGTAAAGGCTACAA 5347
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTG 451615
||||||| |||||||| ||||||||||| ||||||| ||||| |||
Sbjct 5346 ATGGTGACACTCATCTTGGAGGTGAAGACTTTGATAACGCAATAGTG 5300
>seq13163
Length=1194233
Score = 116 bits (128), Expect = 1e-20
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || ||||| || || || || || ||||| || || || || || ||| | ||
Sbjct 710054 AATGCAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTC 709995
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | ||| ||| | || ||||| || || || || ||||||||||| |||||
Sbjct 709994 CGACACCATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 709935
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| |||||||| ||| | || ||||| || ||||| || |||||| | | || |||||
Sbjct 709934 GCAGCGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATAA 709875
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || || |||||||| || ||||
Sbjct 709874 TATCCAAAAGGAATCTACGCTCCACTTAGTTTTGCGACT 709836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975382788419864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |