Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq12921 179 1e-39 seq13163 116 1e-20 >seq12921 Length=52531 Score = 179 bits (198), Expect = 1e-39 Identities = 249/347 (72%), Gaps = 10/347 (3%) Strand=Plus/Minus Query 451270 TACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 ||| ||| |||||||| |||||||| ||| |||| ||| | ||||| || | Sbjct 5637 TACAAAACATGAAAGAGGCAGCAGAAGCTTATCTTGGAGAGGAAGTAAAAGATGCTGTGA 5578 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | || || || || || ||||| || | ||||| |||||||| |||||||||||| | | Sbjct 5577 TAACAGTGCCAGCATACTTCAACGACTCTCAACGTCAAGCAACAAAAGATGCAGGAAAAA 5518 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 | || || |||||||| || |||| | |||||||| || || || || || || |||| Sbjct 5517 TCGCCGGATTAAATGTACTCAGAATAGTAAATGAACCGACTGCCGCAGCGCTTGCTTATG 5458 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | || | | |||||||| | | | |||| | || | ||| ||||||| | Sbjct 5457 GTCT-------TGATAAGAAACATGGGCACACAATA--GTGGTGTATGACCTTGGTGGTG 5407 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 | || |||| || ||||| ||| | || ||||| |||||||||||||| || | Sbjct 5406 GTACATTTGATGTCTCAATACTTGAAATAGGTGAAGGGGTTTTTGAAGTAAAGGCTACAA 5347 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTG 451615 ||||||| |||||||| ||||||||||| ||||||| ||||| ||| Sbjct 5346 ATGGTGACACTCATCTTGGAGGTGAAGACTTTGATAACGCAATAGTG 5300 >seq13163 Length=1194233 Score = 116 bits (128), Expect = 1e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || || || || ||||| || || || || || ||| | || Sbjct 710054 AATGCAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTC 709995 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| ||| | || ||||| || || || || ||||||||||| ||||| Sbjct 709994 CGACACCATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 709935 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || |||||||| ||| | || ||||| || ||||| || |||||| | | || ||||| Sbjct 709934 GCAGCGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATAA 709875 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || || |||||||| || |||| Sbjct 709874 TATCCAAAAGGAATCTACGCTCCACTTAGTTTTGCGACT 709836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975382788419864