Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq13111 264 1e-65 seq13072 104 3e-17 seq12921 100 4e-16 seq13189 89.7 7e-13 seq13092 89.7 7e-13 seq12823 89.7 7e-13 >seq13111 Length=348602 Score = 264 bits (292), Expect = 1e-65 Identities = 847/1306 (65%), Gaps = 10/1306 (1%) Strand=Plus/Plus Query 6497 TCGACCGTTCCTTTCAT-TTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTT 6555 |||||||| | ||||| |||| | |||||| ||||| || ||||| ||| ||| | | Sbjct 227384 TCGACCGTGCTCTTCATGTTGA-AGCAGTAGGACTCGAGGCCGTTCTTGGCCGCGATCGT 227442 Query 6556 TTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAAT 6615 | | | ||| || || || || || ||||| || | |||||| | || || Sbjct 227443 CTCCTTCTGCTTCTCGTCCTCGCTGCGGTATTTCTCCGCCTCGTTCACCATCCTCTCGAT 227502 Query 6616 GTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGA 6675 ||| || || | || ||||| || || || || || ||||| | || || | Sbjct 227503 GTCCTCCTTGCTGAGTCGGCCCTTGTCGTTGGTGATGGTGATCTTGTTCTCCTTGCCGGT 227562 Query 6676 GGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATT 6735 || ||| || | || || || | ||||| || || || | |||||| | || | Sbjct 227563 GGACTTGTCCACGGCGGAGACGTTGAGGATACCGTTCGCGTCGATGTCGAACGTGACCTC 227622 Query 6736 AATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAA 6795 || || || || | |||||| | || || || | | || ||| | || || | Sbjct 227623 GATCTGAGGAACCCCGCGCGGTGCTGGCGGGATGCCGCTGAGCTCGAATTTGCCCAGCAG 227682 Query 6796 ACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTG 6855 |||| ||| | | | | || || || || || || | ||| ||| | || || Sbjct 227683 GTTGTTGTCCTTGGTCATGGCGCGCTCGCCCTCGTACACCTGAATCAACACGCCGGGCTG 227742 Query 6856 ATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGG 6915 ||| || || | |||| | || | ||| | || || || || || ||| Sbjct 227743 ATTGTCGGCGTAGGTCGTGAAGGTCTGGGTCTGCTTCGTCGGGATGGTGGTGTTCCTCTT 227802 Query 6916 AATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC 6975 || | || |||||| | ||| || || |||| || ||||| || || || ||||| Sbjct 227803 GATGAGCGCGGTCATGACACCGCCGGCCGTCTCGATACCCAGAGAGAGCGGCGTGACGTC 227862 Query 6976 CAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 | || | || |||||| || ||| || || ||||| || || || || Sbjct 227863 GAGCAGAAGCAAGTCTTGCACCTCCTCGGATTTGTCGCCGTGCAAGATAGCCGCCTGTAC 227922 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | ||||||||| || || ||||| ||||| || |||| || || || || || ||||| Sbjct 227923 GGCCGCCCCGTACGCCACAGCCTCGTCGGGATTGATCGACTTGTTGAGCTCCTTGCCGTT 227982 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 || | ||| | | | || || || ||||| || || || || ||||||| || Sbjct 227983 GAAGAAGTCCTGCAGGAGCTTCTGGATCTTGGGGATACGCGTGGAGCCGCCGACCAGGAC 228042 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTC 7215 ||| || | | | | || || ||||| | ||| || | | || ||||| || || Sbjct 228043 GATGTCGTGGATCTGGGCCTTGTCCATCTTGGCGTCGCGCAACGACTTCTCGACGGGCTC 228102 Query 7216 CATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGT 7275 | | ||||| | ||| || || ||||| || || || ||||| ||||| || Sbjct 228103 GAGAGTGCCGCGGAAGAGGTCGGCGCAGAGCTCCTCGAAGCGCGCTCGGGTGATGGAGGT 228162 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 ||||| |||| || ||||| ||||| || || || ||| | | || | | || || Sbjct 228163 GTAGAAGTCAATTCCCTCGTACAACGAGTCGATCTCGATGCTGGCCTGCGTGGAGGAGGA 228222 Query 7336 TAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACC 7395 | || ||||| |||||||| || ||||| || | ||| || ||||| ||| ||| Sbjct 228223 CAGGGTACGCTTGGCGCGCTCGCATGCCGTGCGCAGACGGCGGAGGGCGCGCTTGTTCGA 228282 Query 7396 GGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCT 7452 || | || ||||| | || || || ||||| | |||||| | || | | | | Sbjct 228283 GGTCAGGTCCTTCTTGTACTTGCGCTTGAACTCCTGCACGAAGTGATTGACCATGCGGTT 228342 Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512 ||||| || || || || | || || || || ||||| | ||||| || || || Sbjct 228343 G---TCGAAGTCCTCGCCGCCGAGATGGGTGTCGCCGGCGGTGGACTTGACCTCGAAAAT 228399 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||| |||| ||| | | | || || || || || |||||||| || ||||| || || Sbjct 228400 ACCATCTTCGATGGTCAGGATGGACACGTCGAAGGTGCCACCACCGAGATCAAAGATCAG 228459 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 |||||| ||| || ||||| ||||| ||||||||||| || || || || || Sbjct 228460 GACGTTCCGCTCGCCGGTGGCCTTCTTGTCGAGGCCGTACGCGATCGCGGCGGCGGTGGG 228519 Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || ||||| ||||| || ||| |||| ||| | || || | || || || || || | Sbjct 228520 CTCGTTAATGATACGCAGTACA-TTCAAGCCCGAGATGGTACCAGCGTCCTTGGTTGCCT 228578 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | || ||||| ||||| ||||| || ||||| || | || |||| || || |||| | Sbjct 228579 GACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTGATCACGGCGTTGGTCACGGTCTTGC 228638 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | || |||| |||||| | || |||||||| || |||||||| Sbjct 228639 CCAGGTACGCCTCCGCGGTCTCCTTCATTTTTACCAGGACCATCGA 228684 Score = 116 bits (128), Expect = 5e-21 Identities = 143/192 (74%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 |||| ||||| |||||||||||||| |||||||| || ||||| ||||| ||||| Sbjct 229541 AAAATGGTGTTGTTGGGGTTCATGGCGACCTGGTTCTTGGCGGCGTCTCCGATGAGACGC 229600 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGC 8076 || | | |||| || || || || | |||| ||||| || ||||| |||||||| || Sbjct 229601 TCGGTCT---CCGTGAAGGCCACATA-GCTGGGCGTCGTGCGGTTCCCCTGGTCGTTGGC 229656 Query 8077 AATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATC 8136 ||| || || || | ||| || ||||||||||||| || || || || || | ||| Sbjct 229657 AATGATCTCGACCTTGCCGTGCTGGAAGACGCCGACGCAGGAGTAAGTCGTGCCGAGATC 229716 Query 8137 AATACCGATTGC 8148 ||||||| ||| Sbjct 229717 GATACCGACTGC 229728 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| ||||| |||||||| || || || || || |||||| || | || Sbjct 33988 ATCGAAATCCTCACCTCCCAAGTGCGTGTCGCCGTTAGTGGCAACGACTTCGAACACGCC 33929 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | | ||| || || || || ||||| |||||||| || | || || Sbjct 33928 GTTGTCGATGGTGAGCAAACTGACGTCGAAGGTGCCACCGCCCAGGTCGAACACCAGCAC 33869 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| ||||||| ||| || |||||||||||||| || || || || || || Sbjct 33868 GTTCTTCTCGCCGTCTTT---CTTGTCCAGACCGTACGCGATCGCAGCGGCAGTCGGCTC 33812 Query 7636 ATTAATAATACG 7647 || ||||| || Sbjct 33811 GTTGATAATCCG 33800 >seq13072 Length=199900 Score = 104 bits (114), Expect = 3e-17 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 32474 ATTGTTCAAGCCGCTCGAGTTTCTTACGGAGAAGGTACGACGACATCGAGAGGT---GAT 32530 || |||||||| ||||| |||||||| || | || || | ||| || | || ||| Sbjct 89965 ATAGTTCAAGCTGCTCGTGTTTCTTATGGCAAGGGAACAAA-ACA--GATAAGTCAGGAT 90021 Query 32531 GCGGGTCTTATTAGATATTTAATGCGTCATTGGCATAACACACCGTTTGAAATGGTCGAA 32590 | | ||||| | ||||||||| | ||| |||| || || ||||||||| ||| Sbjct 90022 GAAGCACTTATAAAGTATTTAATGAGACATCATCATACAACTCCATTTGAAATGTGTGAA 90081 Query 32591 TTTAAGTTTCATATCAAAATGCCTATATATATTGCACGTCAACACATGCGTCATAGAATG 32650 |||||||||| | ||| | || || | | ||||| | ||| || | ||||||| Sbjct 90082 ATTAAGTTTCACGTGAAACTTCCAATTTTTGTTGCAAGGCAATGGATAAGGCATAGAACT 90141 Query 32651 GCAAGTGTAAATGAATACTCGGCGCGATATTCCATAGTT 32689 |||| |||||||||||| ||||| ||||||| ||| || Sbjct 90142 GCAAATGTAAATGAATATTCGGCAAGATATTCAATACTT 90180 >seq12921 Length=52531 Score = 100 bits (110), Expect = 4e-16 Identities = 225/333 (68%), Gaps = 9/333 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || |||||||| || | || || || || || || || |||||||| | || Sbjct 5312 ATCAAAGTCTTCACCTCCAAGATGAGTGTCACCATTTGTAGCCTTTACTTCAAAAACCCC 5371 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | | | || | | | || |||||||| ||||||||||| |||||| | | | || Sbjct 5372 TTCACCTATTTCAAGTATTGAGACATCAAATGTACCACCACCAAGGTCATACACCACTA- 5430 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || || | | |||||||| ||||| || || | || || || || ||||| Sbjct 5431 --TTGT---GTGCCCATGTTTCTTATCAAGACCATAAGCAAGCGCTGCGGCAGTCGGTTC 5485 Query 7636 A-TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | ||| || | || ||| || | || || || || | |||||||| || ||||| | Sbjct 5486 ATTTACTATTCTGAGTACA-TTTAATCCGGCGATTTTTCCTGCATCTTTTGTTGCTTGAC 5544 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 |||| || ||||| ||||| || || || |||| || || || | |||| || || | Sbjct 5545 GTTGAGAGTCGTTGAAGTATGCTGGCACTGTTATCACAGCATCTTTTACTTCCTCTCCAA 5604 Query 7755 GATACGATTCCGCGATATCTTTCAT-TTTGGTA 7786 |||| | ||| || |||||||| ||| ||| Sbjct 5605 GATAAGCTTCTGCTGCCTCTTTCATGTTTTGTA 5637 >seq13189 Length=1149699 Score = 89.7 bits (98), Expect = 7e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 105238 GCGATTGATGCGAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCT 105297 ||||| || || | ||| ||||||||| ||| | | | | | | | | || || Sbjct 401720 GCGATAGACGCTAAATTGCATACGGCGACCTCTCCGGGACCGGAATATTGAATAACCTCG 401661 Query 105298 GTACACAAATTTGATG-ATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACA 105356 || |||||||| | || |||| || || || ||||| | ||| ||||| ||| |||||| Sbjct 401660 GTGCACAAATT-GCTGCATTTGATAGTGCCTACGTGCTGATGATTCGATTTTCGATTACA 401602 Query 105357 CGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTT 105416 |||||||||||||||||| || ||||| ||||| ||||||| | | ||| || | Sbjct 401601 GTGGTCTTTGTAAAGCATATAAGGCGTTCCAGTTTCCACTTGGGATCTGAGAATGGCGTG 401542 Query 105417 CCAAAT 105422 ||| || Sbjct 401541 CCATAT 401536 >seq13092 Length=269456 Score = 89.7 bits (98), Expect = 7e-13 Identities = 132/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| |||| |||||||| ||||||||||||||||| ||||| || | || | Sbjct 255376 GTGTTGCTGGGATTCATGGCGACCTGGTTCTTCGCCGCGTCGCCGATCAGCC--TC-TCG 255432 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | || || || || ||||| || ||||| || || || ||||| || || || || Sbjct 255433 GTGTCGGTGAAGGCCACGTAGCTCGGCGTCGTCCGGTTGCCCTGGTCATTGGCGATGATC 255492 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || | ||| || ||||||| |||||||| ||||| || || | || || ||| Sbjct 255493 TCGACCTTGCCGTGCTGGAAGACGCCCACGCACGAGTACGTGGTGCCCAGGTCGATCCCG 255552 Query 8144 ATTGC 8148 ||||| Sbjct 255553 ATTGC 255557 >seq12823 Length=34935 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/106 (79%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 22431 AAAAACGTGTAAA-TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAA 22489 ||||| ||||| |||||||| ||||| || || ||||||||||| ||||| | ||| Sbjct 31935 AAAAATCCGTAAAGTTTTATCACGCATCAACGTCGGAGCTCTACGGCAAAGTGATGGAAG 31876 Query 22490 CTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGG 22535 ||| |||||||| || || || ||||| || ||||| |||||||| Sbjct 31875 TTCCGCAAAATGAGAAAACGCCATTTTATCCACGTTCCCCATATGG 31830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635027542616720