Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq13189 96.9 4e-15
seq13242 86.0 8e-12
seq13027 84.2 3e-11
>seq13189
Length=1149699
Score = 96.9 bits (106), Expect = 4e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 112901 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960
|||||| || || || |||||||||||||| || ||||| || || || ||||| || |
Sbjct 402300 TCTTTTAATAGCGCCTATGCCAACAGCCTCGACGGCACAGATTTTAGGGAATAACGAGTC 402359
Query 112961 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 113020
| |||||||||||||||| || ||||| ||||| | | | ||||| ||||| ||
Sbjct 402360 CATTGAACCCTACACGACTAATATCTACGTGAGACGCGTATTGTCTGGAGAATTTGTCAT 402419
Query 113021 TGTCAA 113026
||||||
Sbjct 402420 TGTCAA 402425
>seq13242
Length=2670346
Score = 86.0 bits (94), Expect = 8e-12
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 102093 TTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 102152
||| | || ||| | || |||| ||| | |||||| || ||||||| |||| |||
Sbjct 1010066 TTTAATGCGATCGAGACGCTTCCTTGTGTGGGAAAGAAGGCCAATTGGGCATTGAACTGG 1010125
Query 102153 TTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 102211
| || || | ||| | | ||| |||| || | |||| || ||| ||||||||
Sbjct 1010126 ATCAATCACGAGAGCGC-TACATTTCCTGAACGTGTAATCGCGTTCGCGGCGGTTGAGGG 1010184
Query 102212 TATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGC 102270
|||||||||| || || ||| || || | ||||| ||||||||||| ||||||
Sbjct 1010185 TATCTTCTTCAGCGGCAGTTT-TGCAGCGATCTTCTGGCTGAAGAAGCGAGGGGTCATGC 1010243
Query 102271 CAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGA 102310
|||| ||| ||| |||||| || ||||| || |||||
Sbjct 1010244 CAGGGCTCACCTTTAGCAACGAACTCATCTCGCGAGACGA 1010283
>seq13027
Length=117870
Score = 84.2 bits (92), Expect = 3e-11
Identities = 193/287 (67%), Gaps = 18/287 (6%)
Strand=Plus/Plus
Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 16031
||||| ||||||||||| || | ||| || | |||||||| | ||| ||||| |
Sbjct 82972 TCAAAGCCATCCATCTCAACTAATAACTGATTTAATGTTTGTTCTCTTTCGTCATTACC- 83030
Query 16032 GGCATACCACCAGCAC---TGC---GTTGCTTTCCCACGGCATCAATCTCATCAATGAAG 16085
||||||| || ||| | || | ||||| ||||| |||||||| || ||
Sbjct 83031 -----ACCACCAAGACCAATGCCACGATGTCTACCCACCGCATCTATCTCATCTATAAAA 83085
Query 16086 ACGATGCATGGTTGATTTTCGCGAGCGACTT---CAAAGAGATCCCGTACACGCTTGGCG 16142
| || || || ||||| | || ||| |||| | ||| || ||||| | ||
Sbjct 83086 ATTATACAAGGAGCATTTTT-CTTGC--CTTGATCAAACATATCACGAACACGGCTCGCA 83142
Query 16143 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTA 16202
|| ||||||||||||||||| ||||| | | | ||| | ||| || ||||||
Sbjct 83143 CCAACACCAACAAACATCTCAACAAAATCGGATCCAGAAATGCTAAAGAATGGCACATTA 83202
Query 16203 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249
| ||| || ||||| || || || || | ||| ||||| || || ||
Sbjct 83203 GCTTCTCCTGCAATTGCACGAGCAAGTAAAGTTTTACCAGTTCCAGG 83249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620639527465760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |