Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13189 87.8 2e-12 seq13170 87.8 2e-12 >seq13189 Length=1149699 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 109714 TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGT 109773 ||||| | ||||||||| |||| | | ||||| | |||||| ||||||||||||||| Sbjct 402425 TTGACAATGACAAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTCGTGTAGGGT 402366 Query 109774 TCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATG 109833 || | |||| || || |||| || ||||| || || ||||| ||||| || || || Sbjct 402365 TCAATGGACTCGTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATAGGCGCTATT 402306 Query 109834 AGAAGA 109839 | |||| Sbjct 402305 AAAAGA 402300 >seq13170 Length=905968 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 168430 TTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA 168489 ||||| | | |||||||| ||||| | |||||| || | | | || ||||| ||| Sbjct 514999 TTACCTCTCAATGGAAATATGCCATATTTATCTCTGCCTATGGAAGCGATACCAGACACA 514940 Query 168490 GCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCA--GACTGTG 168547 || | ||||| ||||| || ||||| |||| ||||||||||| ||||| || | || Sbjct 514939 GCCATTGTTTTAGCTGAGTCTCCCTCAGTCAGTATGAGTGTACA--TTCCAATGATTTTG 514882 Query 168548 CCGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCA 168588 |||| || || | || || || || || ||||| |||||| Sbjct 514881 CCGTTCCTGCGTCATTGGCGTCCTCTAACTTGGGTATACCA 514841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588878391952400