Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq13189 96.9 4e-15 seq13027 82.4 9e-11 >seq13189 Length=1149699 Score = 96.9 bits (106), Expect = 4e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGT 105955 |||||||| ||||| ||||| | | | ||||| ||||| || |||||||||||| Sbjct 402425 TTGACAATGACAAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTCGTGTAGGGT 402366 Query 105956 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 106015 |||| | | || ||||| || || || ||||| || |||||||||||||| || || || Sbjct 402365 TCAATGGACTCGTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATAGGCGCTATT 402306 Query 106016 AAAAGA 106021 |||||| Sbjct 402305 AAAAGA 402300 >seq13027 Length=117870 Score = 82.4 bits (90), Expect = 9e-11 Identities = 195/293 (67%), Gaps = 15/293 (5%) Strand=Plus/Plus Query 9273 TCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCA 9329 |||||| ||||| ||||||||||| || | || || | |||||||| | ||| Sbjct 82963 TCATTAGACTCAAAGCCATCCATCTCAACTAATAACTGATTTAATGTTTGTTCTCTTTCG 83022 Query 9330 TCATTCGCTGGCATACCACCAGCAC---TGC---GTTGCTTTCCCACGGCATCAATCTCA 9383 ||||| | ||||||| || ||| | || | ||||| ||||| |||||| Sbjct 83023 TCATTACC------ACCACCAAGACCAATGCCACGATGTCTACCCACCGCATCTATCTCA 83076 Query 9384 TCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTT 9443 || || || | ||||| || ||||| | | ||||| | ||| ||||| | Sbjct 83077 TCTATAAAAATTATACAAGGAGCATTTTTCTTGCCTTGATCAAACATATCACGAACACGG 83136 Query 9444 TTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGG 9503 | || || ||||||||||||||||| ||||| | | | ||| | ||| || Sbjct 83137 CTCGCACCAACACCAACAAACATCTCAACAAAATCGGATCCAGAAATGCTAAAGAATGGC 83196 Query 9504 ACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 ||||||| ||| || ||||| || || || || | ||| ||||| || || || Sbjct 83197 ACATTAGCTTCTCCTGCAATTGCACGAGCAAGTAAAGTTTTACCAGTTCCAGG 83249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589883025431920