Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq13245 118 7e-22
seq13163 109 4e-19
>seq13245
Length=2836997
Score = 118 bits (130), Expect = 7e-22
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851
||||||| ||||| ||||| || || | ||| |||| ||||||||||| ||||| || |
Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136
Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911
| || || ||||| || |||| | ||||||||||| ||||| ||||||
Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076
Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971
| || | || ||||| || |||| ||| ||||| || |||||||| ||||| || |
Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016
Query 34972 AGATCTGCAT 34981
||||||||||
Sbjct 675015 AGATCTGCAT 675006
>seq13163
Length=1194233
Score = 109 bits (120), Expect = 4e-19
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| |||||| ||| | || ||||| || || || |||||
Sbjct 711808 TTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAA 711867
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || |||||||| || | || | || || || || ||||| ||||||
Sbjct 711868 GATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATT 711927
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| || || || |||| ||| ||||||||||| |||||||| |||||
Sbjct 711928 TTCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCAC 711987
Query 34970 AAAGATCTGCATATT 34984
|||||| ||||| ||
Sbjct 711988 AAAGATTTGCATGTT 712002
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
|||||| ||||| | || ||| || || || |||||||| ||||| ||| | ||
Sbjct 709841 CAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTC 709900
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
||||||||||| || || || |||| || ||||| || | || | ||||| |||||
Sbjct 709901 TTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTC 709960
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
|| || || ||| | |||| | || || || || |||| ||| |||||
Sbjct 709961 CTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGT 710020
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| |||||||||||||| || |||||||||||
Sbjct 710021 TTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324581145094224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |