Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq13245 118 7e-22 seq13163 109 4e-19 >seq13245 Length=2836997 Score = 118 bits (130), Expect = 7e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 ||||||| ||||| ||||| || || | ||| |||| ||||||||||| ||||| || | Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || || ||||| || |||| | ||||||||||| ||||| |||||| Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | || ||||| || |||| ||| ||||| || |||||||| ||||| || | Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016 Query 34972 AGATCTGCAT 34981 |||||||||| Sbjct 675015 AGATCTGCAT 675006 >seq13163 Length=1194233 Score = 109 bits (120), Expect = 4e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| |||||| ||| | || ||||| || || || ||||| Sbjct 711808 TTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAA 711867 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||| || | || | || || || || ||||| |||||| Sbjct 711868 GATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATT 711927 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| || || || |||| ||| ||||||||||| |||||||| ||||| Sbjct 711928 TTCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCAC 711987 Query 34970 AAAGATCTGCATATT 34984 |||||| ||||| || Sbjct 711988 AAAGATTTGCATGTT 712002 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||| ||||| | || ||| || || || |||||||| ||||| ||| | || Sbjct 709841 CAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTC 709900 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 ||||||||||| || || || |||| || ||||| || | || | ||||| ||||| Sbjct 709901 TTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTC 709960 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 || || || ||| | |||| | || || || || |||| ||| ||||| Sbjct 709961 CTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGT 710020 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| |||||||||||||| || ||||||||||| Sbjct 710021 TTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324581145094224