Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq12921 167 2e-35
seq13163 120 2e-21
seq13246 114 1e-19
>seq12921
Length=52531
Score = 167 bits (184), Expect = 2e-35
Identities = 205/280 (73%), Gaps = 0/280 (0%)
Strand=Plus/Minus
Query 552295 TACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTA 552354
|||| | ||||| ||||| || ||||||||| | ||||| | ||||| | | |||
Sbjct 4842 TACTACTTGATGTGACTCCACTTTCTCTTGGTATTGAAACTCTAGGAGGAGTATTTACTC 4783
Query 552355 ATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATT 552414
||||| || | |||||||||||||| ||||||||||| || ||||| ||
Sbjct 4782 CACTTATTGAACGTAATACTACTATTCCCACTAAAAAATCTCAGGTGTTTTCAACTGCAG 4723
Query 552415 CAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAG 552474
|||||| ||||| || ||||||||| | | | |||| ||||||||||| | |
Sbjct 4722 AAGATAACCAAACAGCCGTTACAATTAAGGTACATCAAGGTGAAAGAAAATTGGCGGTTG 4663
Query 552475 ATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTAC 552534
| || || ||||||| |||| ||| ||||| || |||||||||||||||||||| |
Sbjct 4662 ACAACAAGTTACTTGGTCAGTTTAGTTTGGAAGGGATACCTCCTGCTCCTCGTGGAGTTC 4603
Query 552535 CGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAAT 552574
| || || ||||| || || || || ||||| ||||||||
Sbjct 4602 CTCAGATCGAAGTAACATTTGACATAGATGCAAATGGAAT 4563
Score = 122 bits (134), Expect = 7e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411
|| |||||| | |||| |||| | |||| | ||||| | ||||| || |||||
Sbjct 5632 AACATGAAAGAGGCAGCAGAAGCTTATCTTGGAGAGGAAGTAAAAGATGCTGTGATAACA 5573
Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471
|| |||||||| || || ||||| ||||||||||| || |||||||| ||| || ||
Sbjct 5572 GTGCCAGCATACTTCAACGACTCTCAACGTCAAGCAACAAAAGATGCAGGAAAAATCGCC 5513
Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531
||| | ||||| || | || | |||||||| ||||| || || ||||| ||||| |||
Sbjct 5512 GGATTAAATGTACTCAGAATAGTAAATGAACCGACTGCCGCAGCGCTTGCTTATGGTCTT 5453
Query 550532 GATAA 550536
|||||
Sbjct 5452 GATAA 5448
>seq13163
Length=1194233
Score = 120 bits (132), Expect = 2e-21
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
|||||| || || |||||||| ||| ||| || || ||||| || | || |||||
Sbjct 711781 GAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCT 711840
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
||||| ||||| || || ||||| || || | ||||||||| |||||||| |||||
Sbjct 711841 GCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCTTC 711900
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAG 563434
||||||||| || || ||| || ||||| || |||| | ||| ||||| |
Sbjct 711901 TTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTAC-CTCGAGGG 711959
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| | ||||| ||||| |||||||| || || ||||||||
Sbjct 711960 TGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 711999
>seq13246
Length=2934203
Score = 114 bits (126), Expect = 1e-19
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAAT 550407
||||||||||| |||| || |||| | ||| || ||| | | |||| || ||
Sbjct 800979 ATGAAAATGAAGGAAACCGCTGCGGCTTAT-TTGAACACTTCAGTGAAGAATGCCGTTAT 801037
Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467
||||||||||| |||||||| ||||||||||| || || || || |||||||| | ||
Sbjct 801038 TACTGTACCAGCCTATTTTAACGACTCACAACGACAGGCGACAAAGGATGCTGGTCAAAT 801097
Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
||| ||| | ||||| || ||| | || ||||| || || || ||||| ||||| || ||
Sbjct 801098 TGCCGGATTGAATGTACTACGTGTAATTAATGAGCCAACCGCAGCTGCGCTTGCTTACGG 801157
Query 550528 ACTTGATAAACA 550539
| || |||||
Sbjct 801158 CATGGACAAACA 801169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028594857166420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |