Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq13202 138 9e-28 >seq13202 Length=1347106 Score = 138 bits (152), Expect = 9e-28 Identities = 183/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 30133 CCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCG 30192 |||| ||| |||| | |||||| ||||||| || || || |||| ||||||||| || Sbjct 1326192 CCCGTGTAATCTGTGCGCATGTCTTTGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCA 1326133 Query 30193 TACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCT 30252 || || || ||||| || || || || || | | |||||| | | |||||| || | Sbjct 1326132 TAGACAGGCCCCAGATCACCTTCCTCTCTATCCGTGAAGCCGCACGAGTCCAAGAAAGCC 1326073 Query 30253 CTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG 30312 | ||||| || ||||||| || | || ||||| || | || ||||||||||| || Sbjct 1326072 CGCGAACCATTCTCGTCCCAAATGTGAACACCCTTATCCGTTAGTTCTTTGGAGTTCGTC 1326013 Query 30313 GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTC 30372 || ||| ||| ||||||| ||| ||||| || || || ||| || |||||||| || Sbjct 1326012 GATCCTTTGATAAACCACAACAGTTCCTCGACCACCGCACGCCAGAACACCCTCTTAGTT 1325953 Query 30373 GTGAGGAGGGGAAA 30386 || || | ||||| Sbjct 1325952 GTAAGTAATGGAAA 1325939 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || ||||| || ||||| |||||||| | || || || || ||| |||||||| || Sbjct 1326550 AGTCCGGTAACATGAGCGATCATGTAGATCAGCAGGGAATACGAGGCTATGTTAAATGGC 1326491 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || ||||||||| | ||||| || ||||| || | ||||||| | || Sbjct 1326490 ACTCCTAGACCCATGTCCGCGCTTCTCTGATAAAGCTGCGCGGACAATTCTCCGTTGTTC 1326431 Query 29989 ACGTAAAACTG-ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 30047 ||||||||||| ||| | | ||||||||| || | ||||| | || | || Sbjct 1326430 ACGTAAAACTGCACA-AAAGCGTGGCACGGTGGCAATGCCATCTTCGGAATATCAATCGG 1326372 Query 30048 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 30083 |||||||| ||| ||||||||| ||||| || || Sbjct 1326371 ATTCCAGGCTGACATGATGATGCGTCTGTCCTCCGG 1326336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408551574802034