Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_018843.1
Length=103299
Score E
Sequences producing significant alignments: (Bits) Value
seq12852 360 1e-94
seq7453 100 2e-16
>seq12852
Length=38369
Score = 360 bits (398), Expect = 1e-94
Identities = 463/639 (72%), Gaps = 0/639 (0%)
Strand=Plus/Minus
Query 56007 CGGCTGCGATCGCGTGGAACCGGGATACGTTGGCATTAAGGTAAACAAATTGGGTGAAGA 56066
||| || || || || |||||||| ||||||||||||| || |||||| | || || ||
Sbjct 37112 CGGTTGTGACCGTGTCGAACCGGGTAACGTTGGCATTAAAGTCAACAAACTCGGGGATGA 37053
Query 56067 CAAAGGTATCGGTGAAGTTGTCGGCGTTGGCCGTCAGTGGACTGGTCTGAATACCGAGCT 56126
|||||| | || ||||| ||||| || ||||| | |||||||| |||||| || |
Sbjct 37052 TAAAGGTGTTGGAGAAGTAGTCGGTGTAGGCCGCTACTGGACTGGCTGGAATACGGAAGT 36993
Query 56127 GTACACCTTCCCCACTTTCAAACAGATGAAAACCTACGATGAGCCGTTCACATTCCAGAT 56186
|| | |||||| || ||||| || ||||| | || || || ||||||| ||||||||
Sbjct 36992 ATATAGCTTCCCTACCTTCAAGCAAATGAAGTCGTATGACGACCCGTTCAACTTCCAGAT 36933
Query 56187 GAGCGACGGGACAGCCATCGGCTACAAAATTGGTGTGGCATATCTGGTTAATCGCGACAA 56246
|||||| || ||| | ||||| || | |||||||| | || ||| |||| |||
Sbjct 36932 GAGCGATGGTACAACTATCGGTTATCACATTGGTGTTACCTACAAGGTAAATCCTACCAA 36873
Query 56247 AGTAACTACCGTATTCCAGACCTATCGCAAAGGTGTTGATGACATTACCGACACTGATCT 56306
||| |||| || |||||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct 36872 GGTAGCTACTGTGTTCCAGACGTATCGTAAGGGCGTTGATGACATTACCGATACTGACCT 36813
Query 56307 GCGCCAGAAGATTGCGGATTCACTGAACCGTCTGGCCAGCCGCATGACTACCGACGCGTT 56366
||||| ||||| || ||||| ||| |||| ||| ||| |||| ||| ||
Sbjct 36812 CAAGCAGAAAATTGCTGACAGCCTGAATCGTTTGGCTTCCCGTATGTCTACGGACAGATT 36753
Query 56367 CATTGACGGTGGCAAGGCGTCTCTGCTCGACAATGCACTGAAAGACATTCAGGCAGAAAT 56426
||| || |||||||| || ||||||| | | || || || |||||| || ||
Sbjct 36752 CATCGATGGTGGCAAAGCAACTCTGCTGGCAGAAGCTCTTGCTGATATTCAGCATGAGAT 36693
Query 56427 GTCACCAGTAGGTATTGAGGTTATTAGCCTGTCATGGGTGGGCAAACCAGACTACCCGGA 56486
| | || || ||||| || || || ||| |||| | |||| || ||||| ||||||
Sbjct 36692 GACTCCGGTTGGTATCGAAGTAATGAGCTTGTCCTATATGGGTAAGCCAGAATACCCGCC 36633
Query 56487 CACGGTCATCGAATCTATCAATGCCAAAGTGACCGCGAACCAGAAAACGCTCCAGCGACA 56546
|| || ||||| |||||||| |||||||| || ||||| | || || ||||| |
Sbjct 36632 GACTGTAATCGATAGCATCAATGCTAAAGTGACTGCAAACCAAACTACACTTCAGCGTGA 36573
Query 56547 GCAGGAAGTTGAGCAGCGCAAGGCAGAAGCGAACATGCTGCGTGAACAAGCCGAAGGTGA 56606
||||||||| |||| || | |||||||| | ||| |||| || || || |||||
Sbjct 36572 GCAGGAAGTGAAGCAACGTGAAGCAGAAGCACAGATGGCTCGTGCTCAGGCAGATGGTGA 36513
Query 56607 AGCCGACGCTATCCGCAAACGTGCTCAAGCAGAAGCTGA 56645
||| |||| ||| || || || |||||||||||||
Sbjct 36512 AGCTGACGTTATTCGTAAGAAAGCCAAAGCAGAAGCTGA 36474
>seq7453
Length=2343
Score = 100 bits (110), Expect = 2e-16
Identities = 173/250 (69%), Gaps = 6/250 (2%)
Strand=Plus/Plus
Query 27907 GGTATTCGTAACAACAACCCAGGCAATCTCGATAAGGGGTCGCCGTGGCAGGGGCTTAT- 27965
|| || ||||| |||||||| ||||| |||| ||| || ||||||||||| ||| |
Sbjct 547 GGCATCCGTAATAACAACCCCGGCAACATCGAGTGGGGTTCTCCGTGGCAGGGTCTTGTC 606
Query 27966 --TAGCAAC---CCTTCCGAACCACGTTTCTGCACGTTCAAAGATCCCGTATGGGGGATT 28020
|| || | |||| ||||| |||||| |||| || || | | || ||
Sbjct 607 CCGCGCGACAGGGCGACCGATCCACGGTTCTGCCAATTCACCGACCCAGCGTACGGCATC 666
Query 28021 CGAGCGCTGGCGGTAACGCTCATCACTTACCACGACAAGCGCCGGGCGAAGGACGGCTCA 28080
|| || || ||||| ||| | || ||| | | ||| ||| || ||||||
Sbjct 667 CGTGCCCTTGCGGTCGTGCTGCTGACCTACTATGGCAAACGCAAAGCCCGCGACGGCAGC 726
Query 28081 AGCATCGATACCATTCGCGAGGTCATCGAGCGCTGGGCGCCGCCAAACGAAAACAACACC 28140
|||||||| | | |||||||| |||||||| ||||| || ||| ||| |||||||||
Sbjct 727 CGCATCGATTCGGTGCGCGAGGTTATCGAGCGTTGGGCACCACCATCCGAGAACAACACC 786
Query 28141 AGCGCCTACG 28150
| ||||||||
Sbjct 787 ACCGCCTACG 796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330378608177880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |