Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq12852 360 1e-94 seq7453 100 2e-16 >seq12852 Length=38369 Score = 360 bits (398), Expect = 1e-94 Identities = 463/639 (72%), Gaps = 0/639 (0%) Strand=Plus/Minus Query 56007 CGGCTGCGATCGCGTGGAACCGGGATACGTTGGCATTAAGGTAAACAAATTGGGTGAAGA 56066 ||| || || || || |||||||| ||||||||||||| || |||||| | || || || Sbjct 37112 CGGTTGTGACCGTGTCGAACCGGGTAACGTTGGCATTAAAGTCAACAAACTCGGGGATGA 37053 Query 56067 CAAAGGTATCGGTGAAGTTGTCGGCGTTGGCCGTCAGTGGACTGGTCTGAATACCGAGCT 56126 |||||| | || ||||| ||||| || ||||| | |||||||| |||||| || | Sbjct 37052 TAAAGGTGTTGGAGAAGTAGTCGGTGTAGGCCGCTACTGGACTGGCTGGAATACGGAAGT 36993 Query 56127 GTACACCTTCCCCACTTTCAAACAGATGAAAACCTACGATGAGCCGTTCACATTCCAGAT 56186 || | |||||| || ||||| || ||||| | || || || ||||||| |||||||| Sbjct 36992 ATATAGCTTCCCTACCTTCAAGCAAATGAAGTCGTATGACGACCCGTTCAACTTCCAGAT 36933 Query 56187 GAGCGACGGGACAGCCATCGGCTACAAAATTGGTGTGGCATATCTGGTTAATCGCGACAA 56246 |||||| || ||| | ||||| || | |||||||| | || ||| |||| ||| Sbjct 36932 GAGCGATGGTACAACTATCGGTTATCACATTGGTGTTACCTACAAGGTAAATCCTACCAA 36873 Query 56247 AGTAACTACCGTATTCCAGACCTATCGCAAAGGTGTTGATGACATTACCGACACTGATCT 56306 ||| |||| || |||||||| ||||| || || ||||||||||||||||| ||||| || Sbjct 36872 GGTAGCTACTGTGTTCCAGACGTATCGTAAGGGCGTTGATGACATTACCGATACTGACCT 36813 Query 56307 GCGCCAGAAGATTGCGGATTCACTGAACCGTCTGGCCAGCCGCATGACTACCGACGCGTT 56366 ||||| ||||| || ||||| ||| |||| ||| ||| |||| ||| || Sbjct 36812 CAAGCAGAAAATTGCTGACAGCCTGAATCGTTTGGCTTCCCGTATGTCTACGGACAGATT 36753 Query 56367 CATTGACGGTGGCAAGGCGTCTCTGCTCGACAATGCACTGAAAGACATTCAGGCAGAAAT 56426 ||| || |||||||| || ||||||| | | || || || |||||| || || Sbjct 36752 CATCGATGGTGGCAAAGCAACTCTGCTGGCAGAAGCTCTTGCTGATATTCAGCATGAGAT 36693 Query 56427 GTCACCAGTAGGTATTGAGGTTATTAGCCTGTCATGGGTGGGCAAACCAGACTACCCGGA 56486 | | || || ||||| || || || ||| |||| | |||| || ||||| |||||| Sbjct 36692 GACTCCGGTTGGTATCGAAGTAATGAGCTTGTCCTATATGGGTAAGCCAGAATACCCGCC 36633 Query 56487 CACGGTCATCGAATCTATCAATGCCAAAGTGACCGCGAACCAGAAAACGCTCCAGCGACA 56546 || || ||||| |||||||| |||||||| || ||||| | || || ||||| | Sbjct 36632 GACTGTAATCGATAGCATCAATGCTAAAGTGACTGCAAACCAAACTACACTTCAGCGTGA 36573 Query 56547 GCAGGAAGTTGAGCAGCGCAAGGCAGAAGCGAACATGCTGCGTGAACAAGCCGAAGGTGA 56606 ||||||||| |||| || | |||||||| | ||| |||| || || || ||||| Sbjct 36572 GCAGGAAGTGAAGCAACGTGAAGCAGAAGCACAGATGGCTCGTGCTCAGGCAGATGGTGA 36513 Query 56607 AGCCGACGCTATCCGCAAACGTGCTCAAGCAGAAGCTGA 56645 ||| |||| ||| || || || ||||||||||||| Sbjct 36512 AGCTGACGTTATTCGTAAGAAAGCCAAAGCAGAAGCTGA 36474 >seq7453 Length=2343 Score = 100 bits (110), Expect = 2e-16 Identities = 173/250 (69%), Gaps = 6/250 (2%) Strand=Plus/Plus Query 27907 GGTATTCGTAACAACAACCCAGGCAATCTCGATAAGGGGTCGCCGTGGCAGGGGCTTAT- 27965 || || ||||| |||||||| ||||| |||| ||| || ||||||||||| ||| | Sbjct 547 GGCATCCGTAATAACAACCCCGGCAACATCGAGTGGGGTTCTCCGTGGCAGGGTCTTGTC 606 Query 27966 --TAGCAAC---CCTTCCGAACCACGTTTCTGCACGTTCAAAGATCCCGTATGGGGGATT 28020 || || | |||| ||||| |||||| |||| || || | | || || Sbjct 607 CCGCGCGACAGGGCGACCGATCCACGGTTCTGCCAATTCACCGACCCAGCGTACGGCATC 666 Query 28021 CGAGCGCTGGCGGTAACGCTCATCACTTACCACGACAAGCGCCGGGCGAAGGACGGCTCA 28080 || || || ||||| ||| | || ||| | | ||| ||| || |||||| Sbjct 667 CGTGCCCTTGCGGTCGTGCTGCTGACCTACTATGGCAAACGCAAAGCCCGCGACGGCAGC 726 Query 28081 AGCATCGATACCATTCGCGAGGTCATCGAGCGCTGGGCGCCGCCAAACGAAAACAACACC 28140 |||||||| | | |||||||| |||||||| ||||| || ||| ||| ||||||||| Sbjct 727 CGCATCGATTCGGTGCGCGAGGTTATCGAGCGTTGGGCACCACCATCCGAGAACAACACC 786 Query 28141 AGCGCCTACG 28150 | |||||||| Sbjct 787 ACCGCCTACG 796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330378608177880