Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq13258 136 5e-27 >seq13258 Length=4813516 Score = 136 bits (150), Expect = 5e-27 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 197052 CTTACAAATGGATTCGTACATCTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCC 197111 |||||| ||| || |||| || ||| || ||| |||||| || | | |||| | || Sbjct 1051183 CTTACAGATGCTTTGGTACTCCTCGTTTTCCTGATCGTAACAAGCCAAGAGGAAACCACC 1051124 Query 197112 GTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGT 197171 ||| || || || ||||| || ||| || | || ||||| || | || || || || Sbjct 1051123 GTAAGTGCCGGTCCTCTTCCCTTTGCCGATGTAACCACCGATCACGATCACGTCGAGTGT 1051064 Query 197172 GTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGC 197231 |||| || || |||| ||||| ||||||||||| |||||| |||| |||| ||| || Sbjct 1051063 ATCGCCGACGCCGTCCAGATAATCCTTCTTCAGTTTCAGCCAGTTTCTCGATCGCTTCGC 1051004 Query 197232 AATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCCTT 197291 ||||||||||| || | |||| ||||| | ||||| |||||||||| | |||| Sbjct 1051003 GATCTCGTAGGTCGCCTCCTTCTCCAACGTCTTCACCATCAGGCCCTCGCAATTTCCCTT 1050944 Query 197292 CAC 197294 ||| Sbjct 1050943 CAC 1050941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676617448987040