Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq12921 145 5e-29
seq13163 86.0 4e-11
>seq12921
Length=52531
Score = 145 bits (160), Expect = 5e-29
Identities = 281/414 (68%), Gaps = 13/414 (3%)
Strand=Plus/Minus
Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849
|||||||||||||||| ||| ||| ||||||||| || || || | || | ||||
Sbjct 4918 GTAAATCCTGATGAAGTTGTAGCAATTGGAGCTGCAGTACAGGCGGGGATCATTCAAGGT 4859
Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909
|| | ||| || | |||| |||| || ||||||||||| | |||
Sbjct 4858 ------GATG------TAAGAGATGTGTTACTACTTGATGTGACTCCACTTTCTCTTGGT 4811
Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969
||||||| | ||||| | | ||| |||||||| | |||||| |||| ||
Sbjct 4810 ATTGAAACTCTAGGAGGAGTATTTACTCCACTTATTGAACGTAATACTACTATTCCCACT 4751
Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029
|||||||| | || ||||| ||| ||||| |||||| | || || || | |
Sbjct 4750 AAAAAATCTCAGGTGTTTTCAACTGCAGAAGATAACCAAACAGCCGTTACAATTAAGGTA 4691
Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089
| |||||||||||||||| | || || || |||||| |||| | | |||
Sbjct 4690 CATCAAGGTGAAAGAAAATTGGCGGTTGACAACAAGTTACTTGGTCAGTTTAGTTTGGAA 4631
Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149
|| || ||||||||||| | ||||||||||| || ||||| || ||||| || ||||||
Sbjct 4630 GGGATACCTCCTGCTCCTCGTGGAGTTCCTCAGATCGAAGTAACATTTGACATAGATGCA 4571
Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGT-AACAAGAGTAAAAA 476202
||||| || | ||| |||| |||||| ||| | | ||||| |||||
Sbjct 4570 AATGGAATAGCACACGTTTCTGCAAAAGATAAAGCTACTGGAAAAGAGCAAAAA 4517
Score = 143 bits (158), Expect = 2e-28
Identities = 130/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772
||||||||| | ||||||| ||||| || || || || |||||||| || || || |||
Sbjct 5608 TATCTTGGAGAGGAAGTAAAAGATGCTGTGATAACAGTGCCAGCATACTTCAACGACTCT 5549
Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832
|||||||||||||| |||||||| |||| ||| || || | ||||| | | || |
Sbjct 5548 CAACGTCAAGCAACAAAAGATGCAGGAAAAATCGCCGGATTAAATGTACTCAGAATAGTA 5489
Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|||||||| || || || || |||||||||||||||||||||||
Sbjct 5488 AATGAACCGACTGCCGCAGCGCTTGCTTATGGTCTTGATAAGAA 5445
>seq13163
Length=1194233
Score = 86.0 bits (94), Expect = 4e-11
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652
|||||| || | ||||||||| ||||| || || || ||||| || || | ||| ||
Sbjct 709874 ATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTG 709933
Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712
||||| ||||||||||| || ||||| || || || || || ||| || || ||
Sbjct 709934 CTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTC 709993
Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | ||| ||||| || ||||| || ||||||||||| ||||| || ||
Sbjct 709994 GGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTG 710050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267610500052184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |