Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_020483.1 Length=42084 Score E Sequences producing significant alignments: (Bits) Value seq13027 93.3 1e-14 >seq13027 Length=117870 Score = 93.3 bits (102), Expect = 1e-14 Identities = 254/381 (67%), Gaps = 16/381 (4%) Strand=Plus/Minus Query 15501 AATAGAACCATACAGAGCTAACGCTTATGTACAAAAAACAATGTCAGGTTCTTTTCTAGT 15560 |||||| ||||| ||| |||| | ||||||| ||| | |||| || ||| |||| Sbjct 12343 AATAGAGCCATATGCAGCAAACGTATTCATACAAAAGACACTTACAGGCTCATTTGTAGT 12284 Query 15561 TAAGAATAAATATTTAGAAAAGTTACTAG-AGAAAAAAGGCATGAACACTGACGCAGTGT 15619 ||||||| || |||| || ||| |||||||| || || || ||| | | | Sbjct 12283 GCGAAATAAATTCTTGCAAAAACTATTAGCAGAAAAAAATCAAGA-CAATGATAAAATAT 12225 Query 15620 GGCAATCTATTGTAGCACA-GAGAGGTTCTGTATTACATTTAGATGAACTATCTGATTAT 15678 || || ||| | || | ||| |||||||| || |||||| || ||| || Sbjct 12224 GGTCTTCAATTTCAACAAACGAG-GGTTCTGTTCAGCACTTAGATTTTCTTAGTGAGCAT 12166 Query 15679 GAAAAAGATACATTTAAAACATCTATAGAAATTAATCAGCAATGGATAATAGAACATGCG 15738 |||||| |||||||||||| | || || | || |||||| ||||||||||| Sbjct 12165 GAAAAATTGACATTTAAAACAGCGTACGAGCTTGACCAAAGATGGATTATAGAACATGCA 12106 Query 15739 GCAGACAGACAACAATT----TATATGTCAAGGTCAGTCAGTAAATGTATTTGTACCTGC 15794 || ||| | || ||| |||||| ||| ||||||||| | || ||||||| Sbjct 12105 AGTGATAGA----ACTTCGCATATTTGTCAATCTCAATCAGTAAATCTGTTCTTACCTGC 12050 Query 15795 TGATGTAAACATTAAAG--AGTTACATGACATACACATGTTAGCTTGGAAAAGAAAAATT 15852 | || |||| || | | || || | ||||||||| | |||||||||| | | | Sbjct 12049 CAACGT--ACATAAACGTTACTTGCACAAGATACACATGCTTGCTTGGAAAAAAGGATTG 11992 Query 15853 AAAACTTTGTATTATTGTAGA 15873 || | || ||||| || ||| Sbjct 11991 AAGAGCTTATATTACTGCAGA 11971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134526017057016