Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_020483.1
Length=42084
Score E
Sequences producing significant alignments: (Bits) Value
seq13027 93.3 1e-14
>seq13027
Length=117870
Score = 93.3 bits (102), Expect = 1e-14
Identities = 254/381 (67%), Gaps = 16/381 (4%)
Strand=Plus/Minus
Query 15501 AATAGAACCATACAGAGCTAACGCTTATGTACAAAAAACAATGTCAGGTTCTTTTCTAGT 15560
|||||| ||||| ||| |||| | ||||||| ||| | |||| || ||| ||||
Sbjct 12343 AATAGAGCCATATGCAGCAAACGTATTCATACAAAAGACACTTACAGGCTCATTTGTAGT 12284
Query 15561 TAAGAATAAATATTTAGAAAAGTTACTAG-AGAAAAAAGGCATGAACACTGACGCAGTGT 15619
||||||| || |||| || ||| |||||||| || || || ||| | | |
Sbjct 12283 GCGAAATAAATTCTTGCAAAAACTATTAGCAGAAAAAAATCAAGA-CAATGATAAAATAT 12225
Query 15620 GGCAATCTATTGTAGCACA-GAGAGGTTCTGTATTACATTTAGATGAACTATCTGATTAT 15678
|| || ||| | || | ||| |||||||| || |||||| || ||| ||
Sbjct 12224 GGTCTTCAATTTCAACAAACGAG-GGTTCTGTTCAGCACTTAGATTTTCTTAGTGAGCAT 12166
Query 15679 GAAAAAGATACATTTAAAACATCTATAGAAATTAATCAGCAATGGATAATAGAACATGCG 15738
|||||| |||||||||||| | || || | || |||||| |||||||||||
Sbjct 12165 GAAAAATTGACATTTAAAACAGCGTACGAGCTTGACCAAAGATGGATTATAGAACATGCA 12106
Query 15739 GCAGACAGACAACAATT----TATATGTCAAGGTCAGTCAGTAAATGTATTTGTACCTGC 15794
|| ||| | || ||| |||||| ||| ||||||||| | || |||||||
Sbjct 12105 AGTGATAGA----ACTTCGCATATTTGTCAATCTCAATCAGTAAATCTGTTCTTACCTGC 12050
Query 15795 TGATGTAAACATTAAAG--AGTTACATGACATACACATGTTAGCTTGGAAAAGAAAAATT 15852
| || |||| || | | || || | ||||||||| | |||||||||| | | |
Sbjct 12049 CAACGT--ACATAAACGTTACTTGCACAAGATACACATGCTTGCTTGGAAAAAAGGATTG 11992
Query 15853 AAAACTTTGTATTATTGTAGA 15873
|| | || ||||| || |||
Sbjct 11991 AAGAGCTTATATTACTGCAGA 11971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134526017057016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |