Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13027 123 3e-23 seq13189 93.3 5e-14 >seq13027 Length=117870 Score = 123 bits (136), Expect = 3e-23 Identities = 255/376 (68%), Gaps = 10/376 (3%) Strand=Plus/Minus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || || || || || || | || || || || || || || ||| | ||||| |||||| Sbjct 83249 CCTGGAACTGGTAAAACTTTACTTGCTCGTGCAATTGCAGGAGAAGCTAATGTGCCATTC 83190 Query 175375 ATC--CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGG 175432 | || | |||| | | ||||| ||||||||||||||||| ||||| | | | Sbjct 83189 TTTAGCATT--TCTGGATCCGATTTTGTTGAGATGTTTGTTGGTGTTGGTGCGAGCCGTG 83132 Query 175433 TTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGA 175492 |||| ||| | ||||| | | ||||| || ||||| | || || ||||||| Sbjct 83131 TTCGTGATATGTTTGATCAAGGCAAGAAAAATGCTCCTTGTATAATTTTTATAGATGAGA 83072 Query 175493 TTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAAC 175552 | ||||||||||| | || || || |||| | | |||||||| ||||||| Sbjct 83071 TAGATGCGGTGGGTAGACATCGTGGCATTGGTCTTGGTGGTGGTAATGACGAAAGAGAAC 83012 Query 175553 AAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGA---CAATGAGACTGGCATTG 175609 ||||| | ||||| || | ||||||||||||||||| |||||| ||| | Sbjct 83011 AAACATTAAATCAGTTATTAGTTGAGATGGATGGCTTTGAGTCTAATGAG---GGCGTAA 82955 Query 175610 TGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTC 175669 | | ||||| || ||||| || |||| || | ||| || || ||| | || |||| Sbjct 82954 TAATAATTGCTGCAACTAACCGTCCGGATGTCTTAGATCCAGCACTGCTTAGGCCTGGTC 82895 Query 175670 GTTTTGATCGCAAGAT 175685 ||||||| || |||| Sbjct 82894 GTTTTGACCGGCAGAT 82879 >seq13189 Length=1149699 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560 |||||| || || || |||||||||||||| || ||||| || || || ||||| || | Sbjct 402300 TCTTTTAATAGCGCCTATGCCAACAGCCTCGACGGCACAGATTTTAGGGAATAACGAGTC 402359 Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCAT 76620 | ||||||| ||||| || || |||||| ||||| | | | || || |||||||| Sbjct 402360 CATTGAACCCTACACGACTAATATCTACGTGAGACGCGTATTGTCTGGAGAATTTGTCAT 402419 Query 76621 TGTCAA 76626 |||||| Sbjct 402420 TGTCAA 402425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596470733503040