Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq11654 80.6 1e-10 >seq11654 Length=7460 Score = 80.6 bits (88), Expect = 1e-10 Identities = 179/262 (68%), Gaps = 10/262 (4%) Strand=Plus/Minus Query 18132 AAGAACAGCACCTTGAACGGTGTGCGGATTCCTCACCTCTTCCCCGGCACCAAGCTGAAC 18191 ||||||| || | |||| ||| ||| || ||||||||||| ||||| ||| |||| Sbjct 2034 AAGAACATCAAAATCGACGGCGTGAAGATCCCGCACCTCTTCCCGGGCACGAAGTTGAAA 1975 Query 18192 TTGCATACGCCGGGTCAGGGCGGGCCGC-TGGGCACGGAATTTGAGGCGTCCATCTTGCG 18250 |||| | | ||| | | |||| || | |||||||| | || | ||| | |||| Sbjct 1974 ATGCAACCCGCCGGT-ACGCCGGGAGGCGTCGGCACGGACTACGAAGAGTCGCTGCTGCG 1916 Query 18251 CTACCTCGCCGCCAACTTCGGCACCAGT--TATGAGCAACTGTCGCGGGACTTCTCAAAG 18308 | || |||| || ||||| | || ||||||||| | ||||||| | | ||| Sbjct 1915 CAACATCGCGGCGTCGCTCGGC--CTGTCCTATGAGCAATTCAGCCGGGACTACACGAAG 1858 Query 18309 ACGAACTATTCGTCCCTGCGCGGTGCCCTGAATGAA--GTGGACAAGCACATGCGGTCCC 18366 || |||||||||||| |||| | | || ||| |||| ||| ||||| | || Sbjct 1857 ACCAACTATTCGTCCGCCCGCGCTTCAATGGCCGAAACGTGG--AAGTACATGGAGAGCC 1800 Query 18367 GCAAACGGGCCGTGGCCGACAA 18388 ||||| | ||| |||||||| Sbjct 1799 GCAAAAAGCTCGTCGCCGACAA 1778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182115323476320