Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_020862.2 Length=74485 Score E Sequences producing significant alignments: (Bits) Value seq12202 203 2e-47 seq12852 156 2e-33 seq9795 143 1e-29 seq8126 129 3e-25 >seq12202 Length=11894 Score = 203 bits (224), Expect = 2e-47 Identities = 486/725 (67%), Gaps = 10/725 (1%) Strand=Plus/Plus Query 1220 ATGTTCGGTGCTAAATCGGGTATTCGTGGTACCAAGATTTTCAACCGTCGTCCTGTACTA 1279 ||||| |||||||| | || | ||||||||||| || ||| |||||||| | Sbjct 7815 ATGTTTGGTGCTAAGACTGGCTTACGTGGTACCAAAATCTTCGGTAAACGTCCTGTTTTG 7874 Query 1280 GCAGTTATGGATGACTTGATTTCAGATGCTGATTCCAAGTCTCCTACTGCGATGGAAGCT 1339 || || |||||||| | || |||| |||| | || ||| | | ||| | || Sbjct 7875 GCTGTGTTGGATGACCTCGTTAGTGATGATGATGCTAAATCTAAGTCAACTATGCAGGCC 7934 Query 1340 ATCAACGATACTGTCTACTCTGGTGTTCAGTATGCTCTCGACCCTACACGTCACAAGATG 1399 ||||| |||||||| ||| |||||| | |||||| | |||||||| ||| ||||| Sbjct 7935 ATCAAGGATACTGTATACAAAGGTGTTGATTATGCTTTGGACCCTACTCGTAGAAAGATT 7994 Query 1400 GTTTTGAACGGTACTCCCTTTAACAAGGAAGACATCGTTTATCAGGCTATTGAATCTGGT 1459 ||||| | || || |||||||||||| | || || ||||| | || | ||||| ||| Sbjct 7995 GTTTTCAGTGGCACACCCTTTAACAAGAACGATATTCTTTATGAAGCAGTGGAATCAGGT 8054 Query 1460 GCATGGGAGGTCAACGTCTGGCCTGTATGTAAGCAATTCCCATGTTC-TGAAAAGGATTT 1518 | ||| | |||||||| | || | ||| || ||||||| ||| | || ||| ||| Sbjct 8055 GGTTGGTACGTCAACGTATTCCCCATTTGTGAGAAATTCCCTTGTGCGAGAGAAGACTTT 8114 Query 1519 CTCAGGTGCTTGGGATGACCGATTCAAATATGATTACGTCAAAGAG-ATGTACGACTCTG 1577 | |||||||||||| ||||| ||| |||||| | ||| ||||| || ||| || Sbjct 8115 GT-AGGTGCTTGGGAAGACCGCTTCTCATATGACTTCGT-TAAGAGCCAATATGACCTTG 8172 Query 1578 CTGTAAAAGAAGGTAAGCTCAATAACTTCAGACAAGAGCTTATGCTTCGCATTACATCTG 1637 ||||| || || | | |||| || || || ||| | | ||||| |||| Sbjct 8173 CTGTAGCTACTGGACAGGTGGCTGCATTCAATCAGGAACTGATGTTGAGGATTACCTCTG 8232 Query 1638 ATGAAGCTCGTTTGGTTCAAGAGGCTGATATTGGTTGGTATTCCAGACAGCACATCCTCA 1697 |||||| | | || | || ||||||| ||||| | || | | Sbjct 8233 ATGAAGAGAGGCTTGTACTGGAATCTGATATCCAATGGTACAAGCGTAAGTCTCTTTTAC 8292 Query 1698 AGAACAAAGAGAAGTATAACTTCTACATCACCACTGACTTTGCCACATCATCCAGA--CA 1755 ||||| || | || ||||||||| |||||||||||||| || || | | ||| || Sbjct 8293 TGAACAGAGGTATGTTTAACTTCTATATCACCACTGACTTCGCTAC--TAGCGAGAAGCA 8350 Query 1756 AACTGCTGACTACTCTGTGTTGTCAGTATGGGCTTATGATCATC-TTGGTACATGGCACT 1814 | | |||||||| || || | || |||||||| || | | | |||| ||| || Sbjct 8351 ATCAGCTGACTATTCAGTTATTTCTGTATGGGC-AATCAATAGCAATGGTGATTGGTTCT 8409 Query 1815 GGGTAGATGGTGTCTGTGAACGTCAGACTATGGATAAATCCATTGATGACCTTTTCAGAT 1874 |||| |||||| ||||| ||||| ||| | || | |||||||||| || ||| Sbjct 8410 GGGTTGATGGTATCTGTCGTCGTCAATTGATGAACAAGAACTTTGATGACCTCTTTAGAC 8469 Query 1875 TGGTTCAGGAATACAATCCACAAAGCACAGGTGTTGAGATTACAGGTCAACAAGGTGGCT 1934 | || || ||| | || || ||| |||| |||| |||||||| ||||| | Sbjct 8470 TAGTAGTTGAGTACCAACCTCAGTCAGTTGGTATTGAAGTTACTGGTCAACAGGGTGGAT 8529 Query 1935 TCATC 1939 ||||| Sbjct 8530 TCATC 8534 >seq12852 Length=38369 Score = 156 bits (172), Expect = 2e-33 Identities = 444/677 (66%), Gaps = 19/677 (3%) Strand=Plus/Plus Query 34862 AGGTAGTATTGAGCGTCGTGAATGTGAGCACATGGCTTAAT--GTTCAGCCTGTGCTTAC 34919 || || || ||||| || ||||| |||||||||||||| || |||| || | || | Sbjct 22709 AGATAATACTGAGCATCATGAATCTGAGCACATGGCTTGATTAGTTCTGCATATGGAGAA 22768 Query 34920 TTGCTCTTACCTTTTTCATGAAAGCTGATGCTGCTCGGTTGTTCAGAAGACAGTATGACT 34979 || | || || |||||| | ||||||||||| ||||| | ||| |||| | Sbjct 22769 TTCCAG--ACTCGTTCCATGAACTCGTTAGCTGCTCGGTTATTCAGTAAACACCATGATT 22826 Query 34980 GCCCCATTGCATTACCTGCTGTACGTCCCTCTGCTGCTGCTTCAAACGGTGTCTGTCTCG 35039 | || | |||||||| || || | || || ||| ||||||| | || || | || | Sbjct 22827 GACCTAAAGCATTACCAGCAGTTCTGCCTTCAGCTTTTGCTTCATATGGAGTTTTACTGG 22886 Query 35040 TGTTGAGGATAGTCTGCTTTAGAAGAGGTGTTCTGACTCTCAAACCAAAGGCTACAGTAA 35099 | || | | || | | || || | | || || || || || |||| | Sbjct 22887 TTCCCCAGACAACTTTTTTGATTAATGGAGTACGAATCCTTAATCCGAATGCACCAGTGA 22946 Query 35100 CGAAGCCATCTTTCGTGGCCTGTTCTAGTTTGGAGTTCACCCAATCAATTGATACCTTAT 35159 | |||||| | |||| || ||| || ||| ||||| ||| || ||| || Sbjct 22947 TATAACCATCTCTGCTGGCTTGAGCTAACTTATCGTTAACCCATTCATCAGAGACCCAAT 23006 Query 35160 ACATTCGTTTGTATGCGGTTTCGATTGCCTGAGCCAATTCCTTACTAAAGCCACAGTTGT 35219 | | | | |||| ||| | || || || || | | ||||||||||| Sbjct 23007 AAAGTTCATGGTATCTCTGTTCAACTGTCTTGGCTTTCTCTTCAGAGAAGCCACAGTTAG 23066 Query 35220 TCATCAGAGTGTGGTAGGTACCCTGATAAGTCAAAGCAAAGGTAGGAGCTTTAGAATCCT 35279 |||||| ||||| || ||||| ||||| || | ||||| ||||| ||||||||||| | Sbjct 23067 CCATCAGTGTGTGATAAGTACCTTGATAGGTAAGTGCAAAAGTAGGTGCTTTAGAATCTT 23126 Query 35280 GCCT---GTGCTGCTTATACTTCTTCGCAATGCTGTTAAT---TGAATCTACCGAAGTAG 35333 | || || ||| || || || |||||||| || || | || || ||| Sbjct 23127 GTCTAAAGT-CTGGATACACGTCA--GCAATGCTATTGATACTTAAAACT------GTAT 23177 Query 35334 GGTCAATATCTGGCATGTGTTCCCCAAAGTACCCGTGTGCTCGTAGACAGTGACCATCAT 35393 | |||||||||||||| || || || || || ||||| ||| | |||||||||| Sbjct 23178 CAACGATATCTGGCATGTGCTCGCCGAAATAAGCGAATGCTCTGAGAGAATGACCATCAT 23237 Query 35394 AACCATCGGTGTAGACCTTTAGTTTTTCAGGATCACGAGTCGTCAAAGCTGAGATACGAT 35453 | |||||||| || || || ||||| | ||| || || |||| |||||| ||||| | Sbjct 23238 ACCCATCGGTATAAACTTTAAGTTTATTAGGGTCTTTGGTTGTCAGAGCTGAAATACGGT 23297 Query 35454 CCTCTAGGGAATCAAAATCCAGACCAACAAATAACCATCCAGAAGGTGCTTCAAAGCATT 35513 | || | | ||||||||| |||| || |||| || | || | ||||||| Sbjct 23298 CTTCCAAACTAGCAAAATCCAATCCAATAAGTAACTTACCTTTTGCCGCCTTAAAGCATC 23357 Query 35514 GCTTGATCAGCTTAGCA 35530 ||||||| |||| ||| Sbjct 23358 GCTTGATTGGCTTGGCA 23374 Score = 86.0 bits (94), Expect = 3e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 36293 ATATCTTCCACTGCATAGTTACCTGCAAACTCTTGAGCCTGAACCTTCAAACCAAGCTGA 36352 ||||||||| ||||||||| || |||||||| |||| ||| | |||| || | || | Sbjct 24106 ATATCTTCCTGTGCATAGTTTCCAGCAAACTCATGAGACTGGGCTTTCAGCCCTAACTCA 24165 Query 36353 TTACCTGCACATGAGTTTGTAGCTAGGTATGTGATAATCT 36392 |||||||||||||| || ||||| || || || | ||||| Sbjct 24166 TTACCTGCACATGAATTGGTAGCCAGATACGTAACAATCT 24205 >seq9795 Length=3651 Score = 143 bits (158), Expect = 1e-29 Identities = 316/469 (67%), Gaps = 10/469 (2%) Strand=Plus/Minus Query 9360 CCTAAGCACTTCGGTAAAGAACTGAAAG-TCTTTTACTACGTCCCACTGCTGGACGATCT 9418 |||||| || | ||||| || | ||| | | | ||||| ||||||||||||| || | Sbjct 3651 CCTAAGAACATGGGTAA-GACCATTAAGCTGTATCACTACATCCCACTGCTGGATGACCG 3593 Query 9419 GAACGTAAATGACCAAGGTTTGGATGCTACAGGTGCTTCCTATGCAGGCGGTAACCTCTA 9478 ||||| || ||||||||| | |||||| | |||||| || ||| ||||||||| || Sbjct 3592 TAACGTCAACGACCAAGGTATTGATGCTGCTGGTGCTACCATTGCTAACGGTAACCTGTA 3533 Query 9479 TGGTGGTTCGCGTGATATCGGTACTGTTACTGGTAAAATGCCTACACTGACTGAGACAGG 9538 |||| | || || ||||| | | |||| |||| | |||||||||| || Sbjct 3532 TGGTTCTAGCAAAGACATTGGTACCATCCCATCTAAACTGCCAGCTCTGACTGAGAATGG 3473 Query 9539 TGGTCGTGTTAACCGTGTTGGTTACACACGTCTGGAACGTACAGGTACTCTGACTGAGTA 9598 ||||||||||||||| ||||||| ||| ||| | | | ||| ||| | | | | Sbjct 3472 TGGTCGTGTTAACCGCGTTGGTTTCACCCGTATTCAGCTGCAAGGCACTATCAAGAAATT 3413 Query 9599 CGGTTTCTTCATGGAATACACTGAAGATTCGCTGATGTTCGATACTGACTCTGATCTGTA 9658 |||||||||| || | ||| | || | || || ||||||||| || ||| | Sbjct 3412 CGGTTTCTTCTATGAGTGGACTCAGGAAGCAATGGATTTTGATACTGACGAAGAGCTGGA 3353 Query 9659 TGGTCACCTGTCGCGTGAAATGCTTCGTGGTGCGAACGAAATCACTGAGGATTTGCTGCA 9718 | |||||| | ||| || ||||| ||||||||||||||||| | |||| Sbjct 3352 TATGCACCTGATTCAGGAAGCTGTTAAAGGTGCTAACGAAATCACTGAGGACCAGTTGCA 3293 Query 9719 AGCAGATATCCTTGCTTCTGCTGATG-TGAAAGTCTTCACTGGTGCTGCTACTTCGATGG 9777 || | || | ||||| || || || || | ||||||||||| || | | Sbjct 3292 GATTGACCTGCTGAATGGTGCTGGTGTTGTTCGTTATC-CGGGTGCTGCTACCTCTAATG 3234 Query 9778 TCACTATGACTGGTGAAGCTGCTGATGCTGAAG------ATGACGGTCT 9820 |||||||||||||| | ||| | ||| || |||||||||| Sbjct 3233 CAGATATGACTGGTGAAGGTACTGCTACTGTAGTTACCTATGACGGTCT 3185 >seq8126 Length=2631 Score = 129 bits (142), Expect = 3e-25 Identities = 400/601 (67%), Gaps = 26/601 (4%) Strand=Plus/Plus Query 6262 CTCTGTCTTTGGTGAGGCTGATGCTTCGCTCCTACAAGACAACCAGAGAATCATTGGTGC 6321 |||| ||| |||||| |||||| | | | || |||| ||||||| || ||||| || Sbjct 16 CTCTATCTATGGTGAACCTGATGGTGCTTTACTGGAAGATAACCAGAAGATTATTGGAGC 75 Query 6322 TGTTACACGTGGTACTATTGATTTGATGGGTCGTTCTGCAAATGCCCAATCTGGG-TACG 6380 | ||| |||| | |||||| | ||| |||| ||| |||| ||| |||| | || Sbjct 76 TACTACTCGTGCCATGATTGATATTCTGGCTCGTAGTGCTAATGGTCAAACTGGTATTCG 135 Query 6381 CAAAAGGGTTCTTGGACCCAGTTAACAAGCGTAGGTTCAATAACGGGGAAGACTTCGAGT 6440 ||| | | ||||| ||||| |||| ||| |||| || ||||||| |||| Sbjct 136 TAAA-GACATGTTGGATGTGACTAACAGACGTAAGTTTGATAAGGGCGAAGACTATGAGT 194 Query 6441 ACAACCCTAATGGTGATCCACGCGCTTCAAT---TCAACA-GATGACTTATCCAGAGATT 6496 ||| | || | || ||| | ||| || ||| | || | ||| |||||| Sbjct 195 TCAATGCAAACGTGGACCCAAGA----CAAGGTGTCTACATGCATACGTCTCCTGAGATT 250 Query 6497 CCCCGTTCTGC---TATGGAAACTATCTCCATGCAAAACGCTGATGCTGAAGCCCTTACA 6553 || | || || | || | | | || || ||| ||| |||||| | ||||| Sbjct 251 CCTCAGTCAGCGCCTCTGATGATTCAGT--AT-CAGAACAATGAAGCTGAATCTCTTACT 307 Query 6554 GGTGTTAAGTCGTTCTCAGGCGGTATCTCAGGAGACGCTTATGGTAACGTTGCTACTGGC 6613 || |||||||| |||||| ||||| || | | |||| || | || ||| |||| Sbjct 308 GGCGTTAAGTCATTCTCACAAGGTATTGCATCACAAGCTTTAGGCGATGTAGCTGCTGGT 367 Query 6614 ATTCGTGGCGCTTTGGATTCTGCTGCAACTCGTGAGATGAGTATTCTCCGTCGTTTGGCA 6673 ||||||||||| |||||| ||||| | | ||||| | ||||||| ||| | ||||| Sbjct 368 ATTCGTGGCGCATTGGATGCTGCTTCTAAACGTGAATTAGGTATTCTTCGTAGATTGGCT 427 Query 6674 AAAGGTATCCAAAAGATTGGCGAGAAGATCGTCACCATGAATGC-AAGAT-TTATGGATG 6731 |||| || | |||||| | ||| | || | |||||||| || | |||| || Sbjct 428 CAAGGCATTGTGGATATTGGCTATAAGTTTGTATCTATGAATGCTGAGTTCTTAT--CTG 485 Query 6732 AAAAGGAAATTGTTCGGGTAACAAACAGTGAATATGT-TGAGGTTTCG-AGAAAAGAACT 6789 || | ||| |||| || | || || ||| | || | || |||| ||| | ||| | Sbjct 486 AAGAAGAAGTTGTACGAATCACTAATGATGATTTCGTATCAG--TTCGTAGAGATGAATT 543 Query 6790 GGAAGGTAACTTTGACCTTAAAGTTGA-TATCTCTACGGCTTCTGTTGATGAACAGAAAG 6848 | || |||||||||||| ||||| | ||| ||||| ||| | ||| | ||||||| Sbjct 544 AGCTGGAAACTTTGACCTT-AAGTTAAGTATTTCTACTGCTGAAGCAGATAACCAGAAAG 602 Query 6849 C 6849 | Sbjct 603 C 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238188706802348