Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq13163 114 2e-20 >seq13163 Length=1194233 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||||||| | |||| || || || || |||||||| | ||||| Sbjct 711785 CGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCG 711844 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| || || ||||| || | | || ||||| ||||| || ||||||||| Sbjct 711845 TCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTA 711904 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | |||| |||||| || |||| || || || || || || Sbjct 711905 TCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGATG 711964 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| || || || ||||| ||||| |||||||| || Sbjct 711965 GTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTT 712002 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 |||||||||||||| | ||||| || || | ||||| || || || ||||| | | Sbjct 709872 ATATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGC 709931 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || ||||| ||||| ||||| ||||| || || ||||||| || | ||| || || Sbjct 709932 TGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTG 709991 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||||| || ||||| || || || ||||| || || || || ||||| || || ||| Sbjct 709992 TCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGC 710051 Query 193359 ATT 193361 ||| Sbjct 710052 ATT 710054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899505304774560