Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq13163 102 2e-16 >seq13163 Length=1194233 Score = 102 bits (112), Expect = 2e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || || || | |||| | || |||| ||| || ||||||||||| | | Sbjct 711817 GATGTTGTAGTCGGAAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACG 711876 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || ||||| || || || |||||||||||||| || ||| ||| ||||| |||| Sbjct 711877 TTGCTGATCCGGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGT 711936 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || | |||||| || || || |||||||| ||||| | ||||| | ||| || || Sbjct 711937 GTCAGAAGCTTCTACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTG 711996 Query 192534 CATTTT 192539 ||| || Sbjct 711997 CATGTT 712002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984312768228300