Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq13229 131 5e-25
seq13170 100 8e-16
seq12970 84.2 6e-11
>seq13229
Length=2253397
Score = 131 bits (144), Expect = 5e-25
Identities = 205/291 (70%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| || |||||||||||||| ||||| || | ||| || || || |||
Sbjct 2239371 TCCATAGCCTTTATCAAACGACGCTGAATGTAACCGGTCTCGGCTGTCTTCACGGCGGTA 2239312
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693
|| || ||||| ||||||||||||| || |||||| | | |||| ||| ||| || ||
Sbjct 2239311 TCGATAAGACCCTCACGACCACCCATCGCGTGGAAGTAGAACTCTGACGG-CGTGAGACC 2239253
Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753
| | | | ||| |||| || ||||| || | ||| ||| | |||| |||| | ||
Sbjct 2239252 GGCTAGATACGAGTTCTCGACAAAACCGCGAGACTCTGGCCCGTAGTCGTCCTTGATGAA 2239193
Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813
|| ||||| || || || |||| | || || ||||| || || |||||||||||
Sbjct 2239192 ATGAGGCAGCGTTCTCTTACGGAAGCCAAAGGGTATTCGCTTACCCTCGACGTTCTGCTG 2239133
Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
|||| || | || | ||| || || || | | ||||||||||||
Sbjct 2239132 GCCCACACAAGCGATGACCTGAGAGATGTTGATGTTGGAGCCCTTGGAGCC 2239082
>seq13170
Length=905968
Score = 100 bits (110), Expect = 8e-16
Identities = 149/207 (72%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 60142 TGTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAAT 60199
||||||||| || ||||||| || || ||||| || || |||| | || || ||
Sbjct 516209 TGTGAAAATGTA--TCTCGGACTGGCAGCATCCTTTCCGCCAGTAAGTCTTGTACCGAAC 516152
Query 60200 TGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCA 60259
|| ||||| ||||| ||||||||||||||||| ||| |||||||| || |||||| |
Sbjct 516151 TGACCGTTAGGCTGCAATAGATTAATGTTGTTGCTGCCCACGAAATTCTGTGCGAGATTA 516092
Query 60260 ACAATAG-CACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATA 60318
| ||| | | ||| | | | |||||| ||||| || | |||||||| | || |
Sbjct 516091 ATAATCGTCGCCA-TCAGGGACGTTTCACCATGATGGTAAGCTGAATGTTCGGCGACCGA 516033
Query 60319 TCCACTGAATTGTGCGACTTTAATTTC 60345
||| ||||| |||||||| | |||
Sbjct 516032 TCCCGCCAATTGCGCGACTTTCACTTC 516006
>seq12970
Length=76075
Score = 84.2 bits (92), Expect = 6e-11
Identities = 170/249 (68%), Gaps = 10/249 (4%)
Strand=Plus/Plus
Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633
||||||| ||| || |||||||||||||| ||||| || | ||| || || || ||
Sbjct 68766 TTCCATAGCCTTTATGAAACGACGCTGAATGTAACCGGTCTCGGCTGTCTTCACGGCGGT 68825
Query 302634 ATCAATTAGA-----CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT 302688
||| || ||| || ||||||||||||| ||||||||| | | |||| |||
Sbjct 68826 ATCGATAAGAAGATTCCCCCACGACCACCCATCGCATGGAAGTAGAACTCTGACGGCATG 68885
Query 302689 AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG 302748
|| || | | | ||| |||| || |||||||| | ||| ||| | ||| ||||
Sbjct 68886 AGACCGGTTAGATACGAGTTCTCGACAAAACCACGAGACTCTGGCCCGTAGTCATCCTTG 68945
Query 302749 GTAAAGTGTGGCAGGGTCCTGTT-CTCATAGCCGTATGGGATACGCTTTCCATCAACGTT 302807
| || | ||||| || || || | | | ||| | | || ||||| || | ||||
Sbjct 68946 ATGAAATCAGGCAGCGTTCTCTTACGGAGA-CCGAAGAGTATTCGCTTACCCT---CGTT 69001
Query 302808 CTGCTGTCC 302816
|||||| ||
Sbjct 69002 CTGCTGGCC 69010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471567585103946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |