Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq13202 89.7 7e-13 >seq13202 Length=1347106 Score = 89.7 bits (98), Expect = 7e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 ||||| || ||| |||| ||||| || || | || ||| || ||| |||| |||||| Sbjct 1325987 GAACTGTTGTGGTTTATCAAAGGATCGACGAACTCCAAAGAACTAACGGATAAGGGTGTT 1326046 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 | ||||| | || |||||||| || | || || || | ||||| || || || ||| Sbjct 1326047 CACATTTGGGACGAGAATGGTTCGCGGGCTTTCTTGGACTCGTGCGGCTTCACGGATAGA 1326106 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 | ||||||||| | || || | ||||| || || ||| | || || || | || Sbjct 1326107 GAGGAAGGTGATCTGGGGCCTGTCTATGGCTTCCAGTGGCGGCACTTTGGCGCCGAGTAC 1326166 Query 172581 ATCGAC-TGTGATACAGATTACACAGGACAAGG 172612 | ||| || | ||||||||||| |||||||| Sbjct 1326167 AAAGACATGCGC-ACAGATTACACGGGACAAGG 1326198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632384780661040