Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 170 2e-37
seq13189 111 1e-19
seq13245 89.7 5e-13
seq13096 87.8 2e-12
>seq13163
Length=1194233
Score = 170 bits (188), Expect = 2e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || ||||| || || |||||||| ||||| ||
Sbjct 710053 ATGCAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTCC 709994
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| |||||| || || || ||||| |||||||| ||||| ||||| |||||
Sbjct 709993 GACACCATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCAG 709934
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||| ||||| || || ||||||||||| || |||| | || || |||||
Sbjct 709933 CAGCGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATAAT 709874
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
|| ||||||||||| || || ||||| || |||||| | ||||||||||
Sbjct 709873 ATCCAAAAGGAATCTACGCTCCACTTAGTTTTGCGACTTCGCGGAGGCG 709825
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | ||||| || || || ||||| || || ||||| |||||||| |
Sbjct 711999 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTAGAAGCTTCT 711940
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || ||| ||||||||||| |||||||| || ||||| |||||
Sbjct 711939 GACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCTCCGGATCAG 711880
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| |||||||||| || || || ||||| || |||| | | || || || |||
Sbjct 711879 CAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCCGACTACAAC 711820
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || || |||| |||| | ||||||||
Sbjct 711819 ATCCAGAAGGAATCTACGCTTCATCTGGTCCTGCGTCTCCGCGGAGG 711773
Score = 105 bits (116), Expect = 6e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || ||||| || ||||| || || || ||||| ||||| |
Sbjct 711771 ATGCAGATCTTCGTAAAGACTCTAACGGGCAAAACCATCACCCTGGAAGTCGAAGCTTCG 711712
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || || ||||| |||||||| || || || || ||||||
Sbjct 711711 GACACCATTGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGGATTCCCCCGGATCAA 711652
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| |||||||| || ||||| || || || || ||| || | | ||||| || |||
Sbjct 711651 CAGCGTTTGATTTTCGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGACTACAAC 711592
Query 24884 ATTCAAAA 24891
|| || ||
Sbjct 711591 ATCCAGAA 711584
>seq13189
Length=1149699
Score = 111 bits (122), Expect = 1e-19
Identities = 213/311 (68%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 138929 GATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988
|||| || | ||| | ||| ||||||||| | ||||| ||||||| ||| | || ||
Sbjct 401860 GATTAGATGTTTTCGTCTCTTGGATAGGATAGAAATTTACGTCGATGACTTTATCTAGAT 401801
Query 138989 TTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTG 139047
| || ||| | || | || || |||| | ||||||||| | || |||
Sbjct 401800 TGCGGGTGACGATTTTTG-CGACTGTCTTAAGTTTATCAAAATCGAAAGTT------TTG 401748
Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107
|||| || | ||| || |||||||| || || |||| ||||| || || ||
Sbjct 401747 GCGTCTGCG---TTGACGAACATGTTGACAGCGATAGACGCTAAATTGCATACGGCGACC 401691
Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167
|| |||| || |||| | || |||| |||||||| || || ||||| || |||
Sbjct 401690 TCTCCGGGACCGGAATATTGAATAACCTCGGTGCACAAATTGCTGCATTTGATAGTGCCT 401631
Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227
| | || ||||| |||||| ||||| ||||||||||||||||| || || |||
Sbjct 401630 ACGTGCTGATGATTCGATTTTCGATTACAGTGGTCTTTGTAAAGCATATAAGGCGTTCCA 401571
Query 139228 GTTTCCACTTG 139238
|||||||||||
Sbjct 401570 GTTTCCACTTG 401560
>seq13245
Length=2836997
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || || || || || || || || ||||| || || ||
Sbjct 675003 ACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGGCG 675062
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
|||| || | || | || || |||||||| ||||| || || || || || |||
Sbjct 675063 TCCGATACTATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGAT 675122
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| || || | ||||| ||||| |||||||||||||||
Sbjct 675123 CAGCAGCGGCTCATCTTCGCCGGCAAACAGCTGGAGGAT 675161
>seq13096
Length=514919
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864
|||||| || || ||||| || | ||||||| ||||| || ||| ||||||| ||
Sbjct 6419 AGGAATTCCGCCGGATCAGCAGAGGCTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAG 6478
Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924
|| |||| || || ||||||||||||||||| || | ||||||||| |||| ||||
Sbjct 6479 AACTTTGTCGGACTACAACATTCAAAAGGAATCCACTTTGCACTTGGTGCTGCGCCTGCG 6538
Query 24925 CGGAGG 24930
|| ||
Sbjct 6539 AGGTGG 6544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449823040720240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |