Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq13163 170 2e-37 seq13189 111 1e-19 seq13245 89.7 5e-13 seq13096 87.8 2e-12 >seq13163 Length=1194233 Score = 170 bits (188), Expect = 2e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || |||||||| ||||| || Sbjct 710053 ATGCAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTCC 709994 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| || || || ||||| |||||||| ||||| ||||| ||||| Sbjct 709993 GACACCATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCAG 709934 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| ||||| || || ||||||||||| || |||| | || || ||||| Sbjct 709933 CAGCGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATAAT 709874 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || ||||||||||| || || ||||| || |||||| | |||||||||| Sbjct 709873 ATCCAAAAGGAATCTACGCTCCACTTAGTTTTGCGACTTCGCGGAGGCG 709825 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| || || || ||||| || || ||||| |||||||| | Sbjct 711999 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTAGAAGCTTCT 711940 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||||||||| |||||||| || ||||| ||||| Sbjct 711939 GACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCTCCGGATCAG 711880 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| |||||||||| || || || ||||| || |||| | | || || || ||| Sbjct 711879 CAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCCGACTACAAC 711820 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || || |||| |||| | |||||||| Sbjct 711819 ATCCAGAAGGAATCTACGCTTCATCTGGTCCTGCGTCTCCGCGGAGG 711773 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || ||||| || ||||| || || || ||||| ||||| | Sbjct 711771 ATGCAGATCTTCGTAAAGACTCTAACGGGCAAAACCATCACCCTGGAAGTCGAAGCTTCG 711712 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || ||||| |||||||| || || || || |||||| Sbjct 711711 GACACCATTGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGGATTCCCCCGGATCAA 711652 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| || ||||| || || || || ||| || | | ||||| || ||| Sbjct 711651 CAGCGTTTGATTTTCGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGACTACAAC 711592 Query 24884 ATTCAAAA 24891 || || || Sbjct 711591 ATCCAGAA 711584 >seq13189 Length=1149699 Score = 111 bits (122), Expect = 1e-19 Identities = 213/311 (68%), Gaps = 11/311 (4%) Strand=Plus/Minus Query 138929 GATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988 |||| || | ||| | ||| ||||||||| | ||||| ||||||| ||| | || || Sbjct 401860 GATTAGATGTTTTCGTCTCTTGGATAGGATAGAAATTTACGTCGATGACTTTATCTAGAT 401801 Query 138989 TTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTG 139047 | || ||| | || | || || |||| | ||||||||| | || ||| Sbjct 401800 TGCGGGTGACGATTTTTG-CGACTGTCTTAAGTTTATCAAAATCGAAAGTT------TTG 401748 Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107 |||| || | ||| || |||||||| || || |||| ||||| || || || Sbjct 401747 GCGTCTGCG---TTGACGAACATGTTGACAGCGATAGACGCTAAATTGCATACGGCGACC 401691 Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167 || |||| || |||| | || |||| |||||||| || || ||||| || ||| Sbjct 401690 TCTCCGGGACCGGAATATTGAATAACCTCGGTGCACAAATTGCTGCATTTGATAGTGCCT 401631 Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227 | | || ||||| |||||| ||||| ||||||||||||||||| || || ||| Sbjct 401630 ACGTGCTGATGATTCGATTTTCGATTACAGTGGTCTTTGTAAAGCATATAAGGCGTTCCA 401571 Query 139228 GTTTCCACTTG 139238 ||||||||||| Sbjct 401570 GTTTCCACTTG 401560 >seq13245 Length=2836997 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || ||||| || || || Sbjct 675003 ACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGGCG 675062 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 |||| || | || | || || |||||||| ||||| || || || || || ||| Sbjct 675063 TCCGATACTATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGAT 675122 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || || || | ||||| ||||| ||||||||||||||| Sbjct 675123 CAGCAGCGGCTCATCTTCGCCGGCAAACAGCTGGAGGAT 675161 >seq13096 Length=514919 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 |||||| || || ||||| || | ||||||| ||||| || ||| ||||||| || Sbjct 6419 AGGAATTCCGCCGGATCAGCAGAGGCTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAG 6478 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 || |||| || || ||||||||||||||||| || | ||||||||| |||| |||| Sbjct 6479 AACTTTGTCGGACTACAACATTCAAAAGGAATCCACTTTGCACTTGGTGCTGCGCCTGCG 6538 Query 24925 CGGAGG 24930 || || Sbjct 6539 AGGTGG 6544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449823040720240