Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq13242 304 1e-77 seq13096 93.3 3e-14 >seq13242 Length=2670346 Score = 304 bits (336), Expect = 1e-77 Identities = 342/456 (75%), Gaps = 4/456 (1%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGT--AGCGTGCCGTGA 34260 ||||||||||||||| ||| | ||||| | |||||| | | | | || ||| ||| Sbjct 999419 CGGCGGGTTTTTCAGGATGTACGTGTTCAACTTATG--ATTACTCTCAAGAAGGCCATGA 999362 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 | ||||| || ||||| ||||| |||| || || || | | || || | || Sbjct 999361 TGTCCGCACGCCTTGCAACCCTGCGAGATCGTGCCTTTCTTCGAGCTAACCATCAATTCG 999302 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 |||||||| ||||| || |||| || | ||| |||| |||||||||||||| |||||| Sbjct 999301 GTCTCCGGATTGTCGCAGGCCGGGCAAAGGACATACTTTCGGATGAAACCATCCAGCAGG 999242 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| | |||||| ||||||||||||||||| || ||||||||| | ||| Sbjct 999241 TCCTGCAGCTTCGTCGCGTCGTGCGAGCCGTTGACGATGAAACGCTCGTTTTTGAAGTCG 999182 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | |||||| || ||||||| |||||| ||||| ||||| |||||||| | |||||||| Sbjct 999181 AACTGCGTCTGGGCGCCCAACTCGCAACCGAAATACTTGGTCGGGTACGTAGCCGGACGA 999122 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 || | |||||| || | || ||| || ||||| || ||||| || ||||| ||||| Sbjct 999121 CCGATCGCCTTCGCCACATCCACCATATTAACGATCACCGTCTTAATACCGTTCCCCTTG 999062 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||| ||||| || ||| |||||||| |||||||| || || ||||| |||||| Sbjct 999061 CCTTCCACCTTCGCCTGGATCCGCGGCATCTTGTAGCGATAAAAGGCGTCGCTGACATTG 999002 Query 34621 CGGTTAACGTTCACAGTCCCCATCGTGGCTGGTGTT 34656 || || ||||||| ||||||| ||| || |||| Sbjct 999001 CGATTGACGTTCAAGCTCCCCATGGTGAATGATGTT 998966 >seq13096 Length=514919 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445 |||||| || || || || | || ||||| ||| ||||||| | |||||| || |||| Sbjct 6431 GGATCAGCAGAGGCTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCGGA 6490 Query 110446 TTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| ||||| || |||||| ||||| | | |||||||| || Sbjct 6491 CTACAACATTCAAAAGGAATCCACTTTGCACTTGGTGCTGCGCCTGCGAGGTGG 6544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412774892280194