Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq12957 86.0 1e-11 >seq12957 Length=67282 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 35579 GGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCAC 35638 ||| ||||| ||| || || || |||||||||||||| ||||||| | || || || Sbjct 16784 GGTGGTGTTTGAGAATTCGAGTGTGACATGACCTTCCCATCCAGGTTCTAAGGGAGTAAC 16843 Query 35639 GTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTT 35698 ||| || || || ||||| | ||||| || ||||| | ||| | || || || || Sbjct 16844 GTTTACTATAATTCCACACCTTGCGTAAGTTGATTTACCAACACAAATGACCAGTACATT 16903 Query 35699 GCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAAT 35755 | || || || || ||||| || |||| ||| || | ||||| || || ||||| Sbjct 16904 TCTTGGTATACGAAAATATTCCACTGTGCTTGCAAGCACAAAGCTATTTGGTGGAAT 16960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825779924938320