Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq13096 107 2e-18 seq13163 100 2e-16 >seq13096 Length=514919 Score = 107 bits (118), Expect = 2e-18 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 107669 GGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGA 107728 |||||||||||| || || | || ||||| ||| ||||||||| || ||| || |||| Sbjct 6431 GGATCAGCAGAGGCTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCGGA 6490 Query 107729 CTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||||||||| || || |||||| ||||| || | ||||||| || Sbjct 6491 CTACAACATTCAAAAGGAATCCACTTTGCACTTGGTGCTGCGCCTGCGAGGTGG 6544 >seq13163 Length=1194233 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 107547 AGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACG 107606 || || || |||||||| ||||| |||||| | || || |||||||| ||| |||| Sbjct 712008 AGATTCAACATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTA 711949 Query 107607 GAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCC 107666 || ||| || ||| | | | || ||| ||||| ||||||||||| | || Sbjct 711948 GAAGCTTCTGACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCT 711889 Query 107667 GTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCG 107726 ||||||||| | || || | ||| || || || ||||| |||| || ||| | | Sbjct 711888 CCGGATCAGCAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCC 711829 Query 107727 GACTACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||||||||| || ||||| |||||| | || |||| Sbjct 711828 GACTACAACATCCAGAAGGAATCTACGCTTCATCTGGT 711791 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || || || || ||| | || ||||||||||| ||| ||||| || ||| Sbjct 710054 AATGCAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTC 709995 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || | | | || || || || || ||||| || | || |||||| Sbjct 709994 CGACACCATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 709935 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | | || | || || ||||||||||| |||| || ||| | | ||||| || Sbjct 709934 GCAGCGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATAA 709875 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| |||||| | ||| | || ||| || | || || || Sbjct 709874 TATCCAAAAGGAATCTACGCTCCACTTAGTTTTGCGACTTCGCGGAGG 709827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398812348738762