Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq13096 107 2e-18
seq13163 100 2e-16
>seq13096
Length=514919
Score = 107 bits (118), Expect = 2e-18
Identities = 92/114 (81%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 107669 GGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGA 107728
|||||||||||| || || | || ||||| ||| ||||||||| || ||| || ||||
Sbjct 6431 GGATCAGCAGAGGCTGATCTTCGCCGGTAAGCAGTTGGAGGACGGCAGAACTTTGTCGGA 6490
Query 107729 CTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||||||||||||| || || |||||| ||||| || | ||||||| ||
Sbjct 6491 CTACAACATTCAAAAGGAATCCACTTTGCACTTGGTGCTGCGCCTGCGAGGTGG 6544
>seq13163
Length=1194233
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 107547 AGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACG 107606
|| || || |||||||| ||||| |||||| | || || |||||||| ||| ||||
Sbjct 712008 AGATTCAACATGCAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTA 711949
Query 107607 GAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCC 107666
|| ||| || ||| | | | || ||| ||||| ||||||||||| | ||
Sbjct 711948 GAAGCTTCTGACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCT 711889
Query 107667 GTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCG 107726
||||||||| | || || | ||| || || || ||||| |||| || ||| | |
Sbjct 711888 CCGGATCAGCAACGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCC 711829
Query 107727 GACTACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764
||||||||||| || ||||| |||||| | || ||||
Sbjct 711828 GACTACAACATCCAGAAGGAATCTACGCTTCATCTGGT 711791
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || || || || ||| | || ||||||||||| ||| ||||| || |||
Sbjct 710054 AATGCAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTC 709995
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || | | | || || || || || ||||| || | || ||||||
Sbjct 709994 CGACACCATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 709935
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | | || | || || ||||||||||| |||| || ||| | | ||||| ||
Sbjct 709934 GCAGCGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATAA 709875
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| |||||||| |||||| | ||| | || ||| || | || || ||
Sbjct 709874 TATCCAAAAGGAATCTACGCTCCACTTAGTTTTGCGACTTCGCGGAGG 709827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398812348738762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |