Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_023556.1 Length=72329 Score E Sequences producing significant alignments: (Bits) Value seq12202 354 4e-93 seq9795 176 2e-39 seq12852 145 4e-30 >seq12202 Length=11894 Score = 354 bits (392), Expect = 4e-93 Identities = 954/1437 (66%), Gaps = 29/1437 (2%) Strand=Plus/Minus Query 67106 GGCTTCCAAGGATTCAGGTACGCCAACTGACTGATCGTATCAATGCAGTCATC---CTTA 67162 ||||||||| ||||| | | |||| ||| ||||||||||| |||| || ||| Sbjct 8827 GGCTTCCAAACCTTCAGACATGACAACATACTAATCGTATCAATAAAGTCGTCATGCTTT 8768 Query 67163 CCCTTGAGTCCATTTGTAGTTGCCAGACGAATCTGGCCCATAAATATTCC--CATGATAT 67220 || | || | | ||| |||| |||| || ||||| | ||| ||| || | Sbjct 8767 GATTTAAAGCCTTCTACAGTAGCCAATCGAAGCTCATCCATAGCT--TCCAACATAATCT 8710 Query 67221 TGGACGTCTTGAGTTCAGAAGGAAAAAACATCTTACCCATCTTGAACCAAGGAACTACGA 67280 | ||| ||||| ||| ||||| | |||||| ||||||||||| | ||| Sbjct 8709 TCTCATCCTTCAGTTCTTCAGGGAAAAAGAACTTACCAGCTTTGAACCAAGGTAATACTG 8650 Query 67281 GGTTAAACCGGGACAGCTTATTGGTGACAGGGCGGATACCCGGTTTCCCGGACTGCT-CC 67339 ||| || | || ||||||||| ||| | |||||| ||||| | || | || Sbjct 8649 AGTTGAATCTCACCATCTTATTGGTATTAGGTCTGATACCTGGTTTGTT--ATTGTTTCC 8592 Query 67340 GAC-GATGCAAAGGTGAACCAGATGTTCCTGGTCATCATCTCTCGTTGTAGCAAGGACAC 67398 | || |||||| | ||||||||||||||| |||||||||| ||| ||| || | Sbjct 8591 TTCAGAAGCAAAGTTAAACCAGATGTTCCTGTTCATCATCTCGTCACGTAACAAAGAGAT 8532 Query 67399 GAAGCCAAACTGCTGACCCGTGGTTTCCACACCTACCGATTGTGGCCGATATTCTTGGGC 67458 ||| ||| ||| ||||| || ||| | ||| || || || || | || || | Sbjct 8531 GAATCCACCCTGTTGACCAGTAACTTCAATACCAACTGACTGAGGTTGGTACTCAACTAC 8472 Query 67459 GAAGCGAAAGAGGCGGTCATACGTTTTTTCCATCGTCTCCCGCTCGCAACTACCATCCAC 67518 | | ||||||| ||| | | || | |||| | || || ||||||| || Sbjct 8471 TAGTCTAAAGAGGTCATCAAAGTTCTTGTTCATCAATTGACGACGACAGATACCATCAAC 8412 Query 67519 CCAGAACCAGTCGCCATTGGCATTGTAAGCCCAGACAGAGATTACCGTGTAGTCGGCGGT 67578 ||||||||| || |||||| |||| ||||| ||||| || || | ||||| || | Sbjct 8411 CCAGAACCAATCACCATTGCTATTGATTGCCCATACAGAAATAACTGAATAGTCAGCTGA 8352 Query 67579 CTGCTTGTCAGAGGTAGCAAAGTCAGTGGTGATGTAGAAGTTGTAC-TGGCTCTTCATCC 67637 ||||| || ||||| |||||||||||||| |||||||| || | |||| || Sbjct 8351 TTGCTTCTCGCTAGTAGCGAAGTCAGTGGTGATATAGAAGTTAAACATACCTCTGT-TCA 8293 Query 67638 GCAGCAACTGCTGACGGCTGTACCACTGAATCTCCCCTTCTTGCACCAGACGTTCTTCCT 67697 | | | || ||| ||||||| || || || ||| | || || | ||||| | Sbjct 8292 GTAAAAGAGACTTACGCTTGTACCATTGGATATCAGATTCCAGTACAAGCCTCTCTTCAT 8233 Query 67698 CGGACGTGATGCGCAGCATCAGTTCCTGGTTGAAGCCTGAGACCTTGCCCGTCTTGACGG 67757 | || || || | || |||||||||||| ||||| | | |||| || || || | Sbjct 8232 CAGAGGTAATCCTCAACATCAGTTCCTGATTGAATGCAGCCACCTGTCCAGTAGCTACAG 8173 Query 67758 CCATGTCGTACTGGTCCTTGACGTACTGGTAGCTGAAGCGATCTTCCCAGGCACCCACGA 67817 | | ||| || ||| ||| ||| | | || |||||| |||||||| ||||| || | Sbjct 8172 CAAGGTCATATTGGCTCTTAACGAAGTCATATGAGAAGCGGTCTTCCCAAGCACCTACAA 8113 Query 67818 ATTCTTCTTTGGGGCAGGGGAACTTCTCGCACACCGGCCAGACGTTCACCGACCAGGCCC 67877 | |||||| | | || ||||| ||||| || | || | ||||| || |||| | | Sbjct 8112 AGTCTTCTCTCGCACAAGGGAATTTCTCACAAATGGGGAATACGTTGACGTACCAACCAC 8053 Query 67878 CCGATTCCACGGCTTCGATCATGA-TGTCGTTCTTGTTGAATGGCGTACCGTTGAAGATC 67936 | |||||||| ||||| || | || | ||||||||||| || || || || |||| | Sbjct 8052 CTGATTCCACTGCTTC-ATAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAAACA 7994 Query 67937 ACTTTGCGGCGTGTGGGATCGAGAGCGTGGTTCACGCCCTTGTACACCGTGTCCTTGATC 67996 | || | || || || || | ||| | | || || ||||| || || |||||||| Sbjct 7993 ATCTTTCTACGAGTAGGGTCCAAAGCATAATCAACACCTTTGTATACAGTATCCTTGATG 7934 Query 67997 GACTGCATAGCGGCCGGGGACTTGGCGTCATCATCAGACACCAAGTCGTCCAGGATACAG 68056 | |||||||| | | || || || ||||||||| || | ||| |||| | |||| Sbjct 7933 GCCTGCATAGTTGACTTAGATTTAGCATCATCATCACTAACGAGGTCATCCA--ACACAG 7876 Query 68057 --AGCACCGGACGCTTACCGAAAATCTTGGAACCACGAAGACCAGTCTTCGCACCGAACA 68114 | || ||||| |||||||| || |||| |||||| | |||||||| ||||| |||| Sbjct 7875 CCAAAACAGGACGTTTACCGAAGATTTTGGTACCACGTAAGCCAGTCTTAGCACCAAACA 7816 Query 68115 T-CTTGCAGCCCAGTCGATGGCCGGACTTGGACT--TGAACTCCAGATAGTTGTCCGTGA 68171 | | || || || ||| || | | | | | || |||| ||| || || | Sbjct 7815 TACGAACA-CCTAGCTTATGCCC--ATCAGCATTAGTAAATTCCATGTAGGCATCAGTAA 7759 Query 68172 AGATGGCGTGAGGAATCCACTCCTGAAGGAAAGGAGAGTTGTCGTATCGGAACTCAATGT 68231 | |||| | ||||| ||| ||||||||| |||||||| || ||| | ||||||| Sbjct 7758 ATTTGGCCTCTGGAATGTACTTCTGAAGGAATTCAGAGTTGTTATAGCGGTATTCAATGT 7699 Query 68232 TCTTCCGTGCGGACTTCACACCGTTGTCCATGGAGTCAGACACGTAGATCATTGCGTCAA 68291 |||| | | || || || || || ||||| |||||||| | || ||||| | || | Sbjct 7698 TCTTTCTTAATGATTTTACCCCATTCTCCATAGAGTCAGAGATATAAATCATACCTTCGA 7639 Query 68292 TACTTCCGAAGTTGGGAAGCTCACCGAACACTGCCAGGAACAGAACGAAGTATTCCATGA 68351 || || || || ||| || ||| || | | || |||| ||||| | Sbjct 7638 TATCACCAAATCCATCAATCTCCCCATACAGGGCAATATATAGGACGAGATATTCACCAA 7579 Query 68352 ACAGAGTTGTCTTAGCAGCACCCCGGAAACAGAGATTGGC-AATGTACT-CGTTTGGTTC 68409 |||| || || ||||| ||| || | || ||||| || ||| | | ||||| | Sbjct 7578 ACAGGGTAGTTTTAGCCATACCACGAGAGCAAAGATTAGCTAATCGAGTACGTTT--ACC 7521 Query 68410 AGTGAGCTTGTCCAGCATCTTCAGGTGAACTGGGGGAGTCTTGTTGGACTCTCCTTGTGC 68469 | | | || |||||||| || |||||| ||||| ||| || || || | | Sbjct 7520 TGCCAATTCATCAAGCATCTTAAGATGAACTACTGGAGTAAGGTTAGATTCCCCACCTTC 7461 Query 68470 ACCATTCACCAACTTGATGAAGTTCATGAAGATGAGTGCGAACTCAGTGGGAACATA 68526 |||||| ||||||||||| ||||| | || | | ||||| ||| |||||||| Sbjct 7460 ACCATTAACCAACTTGATAAAGTTGACATAGTTAATAGCGAATACAGAAGGAACATA 7404 >seq9795 Length=3651 Score = 176 bits (194), Expect = 2e-39 Identities = 733/1143 (64%), Gaps = 78/1143 (7%) Strand=Plus/Plus Query 56713 TAGATAGAGAAATGGGAAGGGGTTTCCCCCTTCCCTTGGTTCAGACCGTACCGATTAGAT 56772 |||||| | ||| || |||||||||| || ||| || | ||| | |||| || Sbjct 2569 TAGATAAAAAAA---GAGTGGGTTTCCCCACTCTCTTAGTCAAAACCTCA---ATTACAT 2622 Query 56773 CGGGGCGACGGTCTTGATCAGACCCAGACGTTCCGGGCGCTTGATCAGGATACCGTAGTA 56832 | | || || ||||||| ||| | | | ||| || ||| ||||| ||||||||| Sbjct 2623 CTGAGCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAACCGTAGTA 2682 Query 56833 CCACTTGATCGAGCTGAAGCCGGTTTCGCCGTAGGGATCGTTGC----GATCCGCCGTTT 56888 ||| ||||| ||| ||||||| |||| || || || || ||| ||| || || | Sbjct 2683 CCATTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGAT--GCAGTCT 2738 Query 56889 CACGACCCGGCATCTTGGTCATGACGGT---GAACTTCACGGTCTTGCCGTCGGTTTGGA 56945 | || || |||||| || ||| |||||| || ||||| || || || |||| Sbjct 2739 CGATGCCTGGTTTCTTGG---TGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGA 2795 Query 56946 AGCCGATGGTCGAGAACGAGTCGTCGCCGACAACCAGCATCGGGAACACGTCGTAGTGCT 57005 | ||||| || | ||| ||| | || ||| |||||| ||||| ||||| || | Sbjct 2796 AACCGATAGTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCATACTTAC 2855 Query 57006 CGGCACCGTCCTTCATGGACGAACGGTAGCCGGGGTTCGTACCCACGGCAGCGCCAGCAC 57065 | | | || || | ||| || ||||| ||| || | || ||||||| Sbjct 2856 CAGAA--GT--------AGCGTA--GTAACCTGGGTTGGTAGTAACTGTTGCACCAGCAC 2903 Query 57066 CGGCCCAGTGCAGCATTTCCGGAACCTGGATGATGCGGAACTTGTCGATGGAACCGACTT 57125 | ||||| | |||||| | ||||| |||||||||||| |||| ||||| | || Sbjct 2904 CTGCCCATTTCAGCATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAACCAATTT 2963 Query 57126 CGCCGTTCAGCAGCGTACCGGCATCGCCGTAGTGCTGGACTTCGATGAACGCCTTGTTGC 57185 | || | ||| | ||||| ||||| |||| ||||| || |||||| || ||| Sbjct 2964 CACCTTGCAGGATAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGT 3023 Query 57186 CGAACAGATCCGTCAT----GGC--CTTCAGTTCGGGAACCAGTTCCGAGCCGACGTACA 57239 | ||| | || |||| || | |||||| ||||||| || || | ||||| Sbjct 3024 CAAACGGGTCTTTCATCTTACGCAGCATCAGTT------CCAGTTCAGAACCAATGTACA 3077 Query 57240 TGACACGGGTGGCACC---GATGACCTTGGTGTCAATCATGCGCGAACCGGTGATGATGG 57296 |||| ||||| || || || |||||||| |||||||| | || | Sbjct 3078 GAGCACG---AGCACCCGGAATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCT 3134 Query 57297 TCGTCTGCGTCGGGGTGCGGTTGTCCGTCAGGATTTGATCCAGGCGCATCAGGTTCTTGT 57356 | |||||| | || ||||||| |||| |||| | |||| || Sbjct 3135 TGGTCTGCATAGGACACAGGTTGTCATTCAG--AGTGAT----ACCCATC---TT----- 3180 Query 57357 ACGAAACGATGGAGGCCG-GAACGGTCACGCCGCCCGTGGTCGTTTCTTCGCCGGTCACG 57415 ||| || ||| | ||| | | | || | || |||| || |||| Sbjct 3181 ----AAC----CAGACCGTCATAGGTAA---CTACAGTAGCAGTACCTTCACCAGTCATA 3229 Query 57416 GTGGCGTCGGAGACGGCAGCACCAGCGTACAGAACCGTACCGGCAGCAGCCAGCAGGTCA 57475 || | ||| |||||||| | || |||| ||| ||| || |||||||||| Sbjct 3230 TCTGCATTAGAGGTAGCAGCACCCGGATAACGAACAACACCAGCACCATTCAGCAGGTCA 3289 Query 57476 CGTTGCAGGACGGCTTCGGTCAGTTGGACTGCCGAGTTCATCAG-TTCACGGGACAGGTG 57534 |||| | | || || | || | | | || | ||| ||| | |||||| Sbjct 3290 ATCTGCAACTGGTCCTCAGTGATTTCG-TTAGCACCTTTAACAGCTTCCTGAATCAGGTG 3348 Query 57535 TTCCTTCAGGCCATCGTCCGAGTCGAAGTCCAGGGATTCCTGGGTGAACTCGTAGAAGTA 57594 | ||| | ||||| | || || |||| | |||||| || |||| |||||| | Sbjct 3349 CATATCCAGCTCTTCGTCAGTATCAAAATCCATTGCTTCCTGAGTCCACTCATAGAAGAA 3408 Query 57595 GCCGAACTTGTGGATCGAACCTTCACGAGCCAGACGGGTGAAGCCCACGCGGTTCACGCG 57654 ||||| || | ||| | |||| | | ||||||||| || |||||||| || || Sbjct 3409 ACCGAATTTCTTGATAGTGCCTTGCAGCTGAATACGGGTGAAACCAACGCGGTTAACACG 3468 Query 57655 GCCACCGTTTTCCGTCAGCGTCGGCAGCTTGCCGGTGATCGTGCCCACGTCCTTGGACGA 57714 ||||| || || ||||| | ||||| || | ||| || || | ||| ||| || Sbjct 3469 ACCACCATTCTCAGTCAGAGCTGGCAGTTTAGATGGGATGGTACCAATGTCTTTGCTAGA 3528 Query 57715 ACCGTACAGGTTGCCGTTGGCGATGGTCACGCCGTTGGCGTCGATACCTTGGCTGTTGAT 57774 ||| |||||||| ||||| || ||||| | || || || ||||||||| ||||| Sbjct 3529 ACCATACAGGTTACCGTTAGCAATGGTAGCACCAGCAGCATCAATACCTTGGTCGTTGAC 3588 Query 57775 GTTGCGGTCGTCCAGCAGCGGGACGTATTCGTAGACCTTGATGGTCTTGCCGAAGTGCTT 57834 ||| ||||| |||||||| |||| ||| | || | ||| |||||||| || | || ||| Sbjct 3589 GTTACGGTCATCCAGCAGTGGGATGTAGTGATACAGCTTAATGGTCTTACCCATGTTCTT 3648 Query 57835 CGG 57837 || Sbjct 3649 AGG 3651 >seq12852 Length=38369 Score = 145 bits (160), Expect = 4e-30 Identities = 348/526 (66%), Gaps = 3/526 (1%) Strand=Plus/Minus Query 30600 TTAGAGGATCGAATCTCCGCCCTGACGACTCGTGACCCGATGAAGCTGAAGGTATACACC 30659 || || || || || || || ||||| || ||||| | || || || || || ||| Sbjct 23304 TTGGAAGACCGTATTTCAGCTCTGACAACCAAAGACCCTAATAAACTTAAAGTTTATACC 23245 Query 30660 GACGGCTATGATGGTCACTGTCTCCGTGCATACACTTACTTCGGTGAGTTGATGAACGGC 30719 || || ||||||||||| | |||| | |||| | |||| ||||| ||| ||| | Sbjct 23244 GATGGGTATGATGGTCATTCTCTCAGAGCATTCGCTTATTTCGGCGAGCACATGCCAGAT 23185 Query 30720 ATTGACCCTGACTCGGTGGCGAGCATCAATTCCATTGAGAACCTGTACAAAGACTTGCGT 30779 || | ||| | || || |||||| ||||| || |||| |||||| | Sbjct 23184 ATCGT---TGATACAGTTTTAAGTATCAATAGCATTGCTGACGTGTATCCAGACTTTAGA 23128 Query 30780 CAGGAGTCGAAAGCTCCGACGTTTGCTTTGACCTATCAGGGTACGTACATCACGCTGATG 30839 || || || ||||| || || ||||| | |||||||| ||||| || ||| |||||| Sbjct 23127 CAAGATTCTAAAGCACCTACTTTTGCACTTACCTATCAAGGTACTTATCACACACTGATG 23068 Query 30840 AAGAACTGTGGCTTCTCGGAAGATAAGGCAAAGCGAATCGAAGCTCGATACCACGAGATG 30899 |||||||||||||| ||||| || || ||| | | ||| ||||||| || | Sbjct 23067 GCTAACTGTGGCTTCTCTGAAGAGAAAGCCAAGACAGTTGAACAGAGATACCATGAACTT 23008 Query 30900 TATGTGGTCAGTACCGAATGGGTGCAGGCAAGACTGGATGAAGCGGCGAAAGTCGGCTAC 30959 ||| |||| | |||||||| | | | | | | |||| | || || || Sbjct 23007 TATTGGGTCTCTGATGAATGGGTTAACGATAAGTTAGCTCAAGCCAGCAGAGATGGTTAT 22948 Query 30960 ATCACCACAGCCTTTGGATTGCGAGTTCGCACTCCCCTGCTGTATCAGGTCATCCGTGGA 31019 ||||| || || ||||| | |||| ||||| | | | | || || | ||| Sbjct 22947 ATCACTGGTGCATTCGGATTAAGGATTCGTACTCCATTAATCAAAAAAGTTGTCTGGGGA 22888 Query 31020 ACCAGCAAGACGCCGTATGAGGCCGAAGCAGAAGGACGCACCGCTGGCAATGCTCTAGGG 31079 ||||| || || || ||||| || |||| ||||| | || ||||| |||||| |||| Sbjct 22887 ACCAGTAAAACTCCATATGAAGCAAAAGCTGAAGGCAGAACTGCTGGTAATGCTTTAGGT 22828 Query 31080 CAGGGCTGGTGTCTCCTGAATAGTCGTGCTTGGGTCGAGTTCATGG 31125 || |||||| | ||||||| || || ||||||||||| Sbjct 22827 CAATCATGGTGTTTACTGAATAACCGAGCAGCTAACGAGTTCATGG 22782 Score = 120 bits (132), Expect = 1e-22 Identities = 297/447 (66%), Gaps = 8/447 (2%) Strand=Plus/Minus Query 34272 GATGTGGGCGTGCAGTTGATCGCCTACAAAGCTCACTGCGAGAAGCTGGCTGATGAAATG 34331 |||||| || | || | || ||||||||| ||| || || || | |||||| | | Sbjct 18826 GATGTGAGCATTAAGCTTATTGCCTACAAACTTCATTGTGAACAGTTAGCTGATAAGCTC 18767 Query 34332 TCCGAACACGAAGAAATTCGTAAGGCAGAAATGAGCCATCGTTACTTCAAGGCTCTGAAG 34391 | || |||||||| |||||||| |||||| | | || | ||||| || || || ||| Sbjct 18766 CCTGACCACGAAGAGATTCGTAAAGCAGAACTACGTCACAGATACTTTAAAGCACTCAAG 18707 Query 34392 CTGGCAGGTGCACTGGCCTTCGTGGACGAATCCGTCCTCGTTGAGATGGACCAC--CTGA 34449 | | || | || || || ||||| | ||| | | | ||| || | Sbjct 18706 TTATCTGGAGTGTATGCATTTGTTGACGAGAC--TCCAGAAGTAACAGAATCACAGCTTA 18649 Query 34450 AGCAAGCCATCCTGCTGGTGGAAGAATCGGGTGCTGCTTTCCAAACGATCCTCACTCGTG 34509 | || || | | || ||||| || |||| |||||| | | || |||| ||||| Sbjct 18648 TGTCTGCGATTAAGTTAGTCGAAGAGTCTGGTGAAGCTTTCAATAGAATTCTCAGTCGTG 18589 Query 34510 AGAAGGCGTATGTGAAGCTGGCGAAGTACATCGCTGCCGTCGGCAGTGAACTGACCCATG 34569 | ||| ||||||||| | || || ||||| || | || |||| ||| | || |||| Sbjct 18588 AAAAGAACTATGTGAAGTTAGCCAACTACATTGCAGAAGTAGGCAAGGAAGTAACTCATG 18529 Query 34570 CCGATCTGGTTGAGGCGCTGCCGTTCTACAAGTCCGGCAATGCGTTCCGCAACGAGATC- 34628 ||| |||| |||| | || |||||||| | | || | || | | | ||| | Sbjct 18528 TAGATTTGGTAGAGGACTTACCATTCTACAAAGGCAGTAACTC--TCAGAAGCAAGAGCT 18471 Query 34629 -ATGACCCTGGCCACCGCCTGGGGCTACAAGCAGCACATCATCATCAAGAAGTCCTTCAC 34687 |||| | |||| || | ||||| ||||| ||||||||||||||||| | |||| Sbjct 18470 AATGAATTTAGCCATTGCTTATGGCTATAAGCATCACATCATCATCAAGAAAACATTCAT 18411 Query 34688 GGACGGCATCGAATTCTTCAAGGGTGA 34714 || || || || |||||||||||||| Sbjct 18410 TGATGGTATTGAGTTCTTCAAGGGTGA 18384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231290621588020