Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_024123.1 Length=64113 Score E Sequences producing significant alignments: (Bits) Value seq12852 491 2e-134 >seq12852 Length=38369 Score = 491 bits (544), Expect = 2e-134 Identities = 806/1157 (70%), Gaps = 6/1157 (1%) Strand=Plus/Minus Query 34942 GATGCCATCGAGCTGCTGGAGCGCCGCCGCAGCTACCTCGAAGAAGCTGTCGGCCTGACG 35001 ||||| ||||| |||||| |||| || | | ||| |||||||| || | || Sbjct 29800 GATGCTATCGACCTGCTGAAGCGTCGTCAGAAGTACGACGAAGAAGAAGTTGTTGTGCGC 29741 Query 35002 CGCACTTTCAACGTCTTCCCTTGGGACGGCGCGAACGCCATCAACATCGCCCTGGCACGT 35061 || |||| |||||| ||||| ||||| || || | || | | | ||| ||| | Sbjct 29740 CGTACTTACAACGTATTCCCGTGGGATGGTGCTCATGCACTGATGAACGCGCTGACCGAA 29681 Query 35062 CGTTTCGGCTGGGCTGCCGCCGAGGCTACCCCTGGCTTCTTCGGCAGCACTCCGCCGAAG 35121 |||| ||| |||||||| || || || || || |||||||| || | || ||| || Sbjct 29680 CGTTACGGTTGGGCTGCTGCTGAAGCAACTCCGGGCTTCTTTGGTTCTAACCCACCGCAG 29621 Query 35122 ATGATCACCATCGAAGTCGGCCCTGGCCAGACCCGTCGTGTACCGTGGGGCCGCTTCAGC 35181 ||| | | | |||||||| || | ||| |||||||||||||||||| Sbjct 29620 ATGCTGGACGTACAAGTCGGCTACGGTCGTACCAAAAAAGTACCGTGGGGCCGCTTCTCT 29561 Query 35182 ATGCCGGGTATCGATGGTTACGTGGGAACCAGCGCCAGCATGAAAGACGGCCGTCTGTGC 35241 ||||| | || || | || ||| | | || |||||| |||||| | || Sbjct 29560 CTGCCGCAGGTTGAAGGCTTTGTTCAGACCTCTGTCGCCAAGAAAGATGGCCGTATCAGC 29501 Query 35242 TTCCAGCTGGTCGCGGAGGTCCGGCGTAAGGACGAGCAGACCATCGAGAAGCTGTTCGAT 35301 || ||||||| || | || | ||| ||||||| |||||||| |||||||||| Sbjct 29500 TTTGAGCTGGTAGCCAAAGTACTGCGCGCTGACGAGCGTACCATCGAACTGCTGTTCGAT 29441 Query 35302 GAAGTCGAAGACGTGCTGAAGCAC-GAATCGATCTACGCCGGCAAGGCGATCAAGATCCG 35360 || ||||| |||| |||| ||||| ||||| || ||||||| ||||| || Sbjct 29440 ACCGTGGAAGAAAAGCTGC-GCACTGAATCCATCTATATGGGTCAGGCGATTAAGATTCG 29382 Query 35361 CTTCCGTGACGACGACGGCAACACCCTGGAAATGCCCGAGCCGAAGTTCCTCGACGTGAG 35420 |||||| ||| | |||||| || ||||||||||| || || | ||| | || || Sbjct 29381 CTTCCGCGACAATGACGGCGACCTGCTGGAAATGCCGGAACCAGAATTCATGAACCTGCA 29322 Query 35421 CGGCGTGTCGCGCGACATGCTGGTGTACTCGAAAGAAGTCACCGACTCCATCGAAACCAA 35480 || | || || || ||||| || || | || || | | | || |||||||| Sbjct 29321 AGGTATCTCTCGTGATTCTCTGGTTTATTCCGACGATGTTAACCAGCTGATTGAAACCAA 29262 Query 35481 CCTGTTCACGCCCATCGAGCGCGTCCACGACTGCATCAAGAACGGTATCCCGGTCAAGCG 35540 |||||||||||| || ||||||||| | ||||| ||| ||| || ||||| || || Sbjct 29261 CCTGTTCACGCCGATTGAGCGCGTCGAAGACTGTATCGCCAACCACATGCCGGTTAAACG 29202 Query 35541 CGGTGTCCTATTGGGCGGCCCGTACGGTACCGGTAAGACCCTGGCCGCCACCGTTGCCTC 35600 ||| || || ||||||| || |||||||| ||||| || |||| || || ||||| | Sbjct 29201 CGGCGTTCTGCTGGGCGGGCCATACGGTACTGGTAAAACTATGGCTGCGACTGTTGCTGC 29142 Query 35601 GCGTCTCGCTGTCGACGCCGGCGTAACCTACCTGTACGTGCCGCGTGCGGACGAGCTGGC 35660 | | |||| || | | ||||| |||||| | |||||||||||| | ||||||||| | Sbjct 29141 GTCTATCGCGGTTAAAACTGGCGTTACCTACGTTTACGTGCCGCGTTCTGACGAGCTGTC 29082 Query 35661 CGACGCCATCGAGTTCGCCAAGCAGTACCAAGACGTGGCCTGCGTGATCTTCTGCGAGGA 35720 || || || ||||||| ||||||||| || || ||||| |||||||| || || Sbjct 29081 TGATGCGATTCAGTTCGCTAAGCAGTACAGCGATAAAGCGTGCGTTATCTTCTGTGAAGA 29022 Query 35721 CATCGATC--GCTGCATGAGCGGCGAGCGTTCGGTGGCAATGGACGACATCCTGAACATC 35778 ||||| | |||| || ||| || ||| ||| |||||||| ||||||||||| Sbjct 29021 TATCGACCGTGCTGTAT--CCGGTGAACGTAGCGTGAAGATGGACGATATCCTGAACATT 28964 Query 35779 CTCGACGGCATCGACACCAAGTCGTCGCGGATCATCACCGTTCTCACCACCAACCACCTG 35838 || || || ||||||||||| || || || |||||||||||||| || ||||||||||| Sbjct 28963 CTGGATGGTATCGACACCAAATCTTCTCGCATCATCACCGTTCTGACTACCAACCACCTC 28904 Query 35839 ACCGACATCAACCCGGCCATGCTGCGCCCCGGCCGCCTGGACGCGATCATCGACGTGGTT 35898 ||||||||||||| |||||||| || ||||| ||||| || |||||||| ||| | Sbjct 28903 GAAAACATCAACCCGGCAATGCTGCGTCCGGGCCGTCTGGATGCCATCATCGATGTGACT 28844 Query 35899 CCGCCGGACGCCGAAGCCGTCGTTCGCCTGATCAAGCTCTACGGCGCTGGCGACATCGAC 35958 ||||| || || |||| || | ||| | || || || || | |||||| Sbjct 28843 CCGCCAGATGCGAAAGCAGTTGAAAAACTGGTTCGTCTGTATGGTCGTGACACCATCGAT 28784 Query 35959 GAGCAAGCTGACCTGACCCCGGCGGCCGAGCTGCTGGCCGGTGCGATTCCGGCGGTCATC 36018 | | |||||||||| || | ||| |||||| ||| | |||||||| || || Sbjct 28783 ACGTCCGAAGACCTGACCCTGGTTGGCGAAGCGCTGGCTGGTACCATTCCGGCAGTTATT 28724 Query 36019 GCCGAGGTAGTCAAGCGTTCGAAGCTGGCCCAGCTCCAGCTGCAAGCGCCGGGCACCGCG 36078 || || || || || ||| | |||||| |||||||||| || | |||||| || | Sbjct 28723 GCTGAAGTGGTTAAACGTGCCAAGCTGCACCAGCTCCAGTATCAGGAGCCGGGTACTGTT 28664 Query 36079 ATCGAGAAGATCACCGG 36095 |||||| | |||| ||| Sbjct 28663 ATCGAGCAAATCAGCGG 28647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 205003669769412